Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 PROS2P-201ENST00000474651 1951 ntBASIC5.35□□□□□ -1.55
SLC28A1O00337 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SLC28A1O00337 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.34□□□□□ -1.55
SLC28A1O00337 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.34□□□□□ -1.55
SLC28A1O00337 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.34□□□□□ -1.55
SLC28A1O00337 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SLC28A1O00337 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SLC28A1O00337 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.34□□□□□ -1.55
SLC28A1O00337 NEPNP-201ENST00000404786 1371 ntBASIC5.34□□□□□ -1.55
SLC28A1O00337 LINC01963-201ENST00000562038 3148 ntBASIC5.34□□□□□ -1.55
SLC28A1O00337 SNORA64.1-201ENST00000362600 132 ntBASIC5.34□□□□□ -1.55
SLC28A1O00337 AL353625.1-202ENST00000366273 571 ntBASIC5.34□□□□□ -1.55
SLC28A1O00337 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.34□□□□□ -1.55
SLC28A1O00337 RMRPP5-201ENST00000411156 267 ntBASIC5.34□□□□□ -1.55
SLC28A1O00337 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.34□□□□□ -1.55
SLC28A1O00337 AC007161.1-204ENST00000423039 460 ntBASIC5.34□□□□□ -1.55
SLC28A1O00337 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.34□□□□□ -1.55
SLC28A1O00337 AC006335.2-201ENST00000437993 330 ntBASIC5.34□□□□□ -1.55
SLC28A1O00337 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.34□□□□□ -1.55
SLC28A1O00337 RPL9P15-201ENST00000491096 532 ntBASIC5.34□□□□□ -1.55
SLC28A1O00337 AC021193.1-201ENST00000511607 420 ntBASIC5.34□□□□□ -1.55
SLC28A1O00337 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.34□□□□□ -1.55
SLC28A1O00337 SNORA70.20-201ENST00000516848 126 ntBASIC5.34□□□□□ -1.55
SLC28A1O00337 AC011853.1-201ENST00000518911 454 ntBASIC5.34□□□□□ -1.55
SLC28A1O00337 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.34□□□□□ -1.55
SLC28A1O00337 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.34□□□□□ -1.55
SLC28A1O00337 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.34□□□□□ -1.55
SLC28A1O00337 HMGB1P42-201ENST00000532126 553 ntBASIC5.34□□□□□ -1.55
SLC28A1O00337 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.34□□□□□ -1.55
SLC28A1O00337 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.34□□□□□ -1.55
SLC28A1O00337 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.34□□□□□ -1.55
SLC28A1O00337 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
SLC28A1O00337 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
SLC28A1O00337 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SLC28A1O00337 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SLC28A1O00337 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.34□□□□□ -1.55
SLC28A1O00337 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.34□□□□□ -1.55
SLC28A1O00337 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.34□□□□□ -1.55
SLC28A1O00337 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SLC28A1O00337 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SLC28A1O00337 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.34□□□□□ -1.55
SLC28A1O00337 AC007842.1-201ENST00000597336 2039 ntBASIC5.34□□□□□ -1.55
SLC28A1O00337 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.34□□□□□ -1.55
SLC28A1O00337 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.34□□□□□ -1.56
SLC28A1O00337 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.34□□□□□ -1.56
SLC28A1O00337 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
SLC28A1O00337 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
SLC28A1O00337 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
SLC28A1O00337 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SLC28A1O00337 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SLC28A1O00337 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SLC28A1O00337 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
SLC28A1O00337 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
SLC28A1O00337 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
SLC28A1O00337 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SLC28A1O00337 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
SLC28A1O00337 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
SLC28A1O00337 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SLC28A1O00337 PPIAP9-201ENST00000403866 498 ntBASIC5.33□□□□□ -1.56
SLC28A1O00337 SEPT7P8-201ENST00000413308 775 ntBASIC5.33□□□□□ -1.56
SLC28A1O00337 AL512637.1-201ENST00000439523 1231 ntBASIC5.33□□□□□ -1.56
SLC28A1O00337 TAAR4P-201ENST00000454843 1039 ntBASIC5.33□□□□□ -1.56
SLC28A1O00337 AC098583.1-201ENST00000480875 255 ntBASIC5.33□□□□□ -1.56
SLC28A1O00337 AGGF1P3-201ENST00000493675 1213 ntBASIC5.33□□□□□ -1.56
SLC28A1O00337 AL117692.1-201ENST00000494283 713 ntBASIC5.33□□□□□ -1.56
SLC28A1O00337 AC092349.1-201ENST00000504903 310 ntBASIC5.33□□□□□ -1.56
SLC28A1O00337 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.33□□□□□ -1.56
SLC28A1O00337 AC114781.3-201ENST00000512083 142 ntBASIC5.33□□□□□ -1.56
SLC28A1O00337 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.33□□□□□ -1.56
SLC28A1O00337 AP001804.2-201ENST00000533932 910 ntBASIC5.33□□□□□ -1.56
SLC28A1O00337 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.33□□□□□ -1.56
SLC28A1O00337 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.33□□□□□ -1.56
SLC28A1O00337 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.33□□□□□ -1.56
SLC28A1O00337 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.33□□□□□ -1.56
SLC28A1O00337 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.33□□□□□ -1.56
SLC28A1O00337 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.33□□□□□ -1.56
SLC28A1O00337 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.33□□□□□ -1.56
SLC28A1O00337 AL356608.1-201ENST00000610034 820 ntBASIC5.33□□□□□ -1.56
SLC28A1O00337 AC025574.2-201ENST00000615621 514 ntBASIC5.33□□□□□ -1.56
SLC28A1O00337 AL391597.1-201ENST00000618707 694 ntBASIC5.33□□□□□ -1.56
SLC28A1O00337 AC048341.3-201ENST00000619323 491 ntBASIC5.33□□□□□ -1.56
SLC28A1O00337 AC083843.2-201ENST00000568248 6253 ntBASIC5.33□□□□□ -1.56
SLC28A1O00337 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SLC28A1O00337 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.33□□□□□ -1.56
SLC28A1O00337 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SLC28A1O00337 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SLC28A1O00337 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.33□□□□□ -1.56
SLC28A1O00337 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.33□□□□□ -1.56
SLC28A1O00337 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
SLC28A1O00337 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SLC28A1O00337 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SLC28A1O00337 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SLC28A1O00337 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.33□□□□□ -1.56
SLC28A1O00337 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SLC28A1O00337 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SLC28A1O00337 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.33□□□□□ -1.56
SLC28A1O00337 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SLC28A1O00337 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
SLC28A1O00337 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
SLC28A1O00337 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms