Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.22□□□□□ -1.57
NPIPA3F8WFD2 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.22□□□□□ -1.57
NPIPA3F8WFD2 AL163952.1-202ENST00000569625 600 ntBASIC5.22□□□□□ -1.57
NPIPA3F8WFD2 AP001267.4-201ENST00000602598 545 ntBASIC5.22□□□□□ -1.57
NPIPA3F8WFD2 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.22□□□□□ -1.57
NPIPA3F8WFD2 AP000864.1-201ENST00000609424 650 ntBASIC5.22□□□□□ -1.57
NPIPA3F8WFD2 OR8G7P-201ENST00000616658 848 ntBASIC5.22□□□□□ -1.57
NPIPA3F8WFD2 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NPIPA3F8WFD2 AC022919.1-201ENST00000624979 626 ntBASIC5.22□□□□□ -1.57
NPIPA3F8WFD2 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.22□□□□□ -1.57
NPIPA3F8WFD2 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NPIPA3F8WFD2 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.22□□□□□ -1.57
NPIPA3F8WFD2 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NPIPA3F8WFD2 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
NPIPA3F8WFD2 AC011503.2-201ENST00000594230 1500 ntBASIC5.22□□□□□ -1.57
NPIPA3F8WFD2 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NPIPA3F8WFD2 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.22□□□□□ -1.57
NPIPA3F8WFD2 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
NPIPA3F8WFD2 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
NPIPA3F8WFD2 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
NPIPA3F8WFD2 FBXL21-201ENST00000297158 1305 ntBASIC5.22□□□□□ -1.57
NPIPA3F8WFD2 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
NPIPA3F8WFD2 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.57
NPIPA3F8WFD2 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.57
NPIPA3F8WFD2 OR10AB1P-202ENST00000641219 1686 ntBASIC5.21□□□□□ -1.57
NPIPA3F8WFD2 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
NPIPA3F8WFD2 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
NPIPA3F8WFD2 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.57
NPIPA3F8WFD2 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.21□□□□□ -1.57
NPIPA3F8WFD2 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
NPIPA3F8WFD2 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
NPIPA3F8WFD2 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 RN7SKP160-201ENST00000363804 340 ntBASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 MT-RNR1-201ENST00000389680 954 ntBASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 RPL11P3-201ENST00000395256 523 ntBASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 NPM1P37-201ENST00000403105 874 ntBASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 AL357752.1-201ENST00000412817 349 ntBASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 BMS1P17-202ENST00000416720 316 ntBASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 AC019205.1-201ENST00000421830 730 ntBASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 TNPO1P1-201ENST00000423641 1138 ntBASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 NDUFA5P1-201ENST00000433858 341 ntBASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 AC096775.1-201ENST00000437724 448 ntBASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 H3F3BP1-201ENST00000440551 403 ntBASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 SNRPFP2-201ENST00000440710 251 ntBASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 AC015983.1-201ENST00000441577 373 ntBASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 AL161722.1-201ENST00000446972 1032 ntBASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 MEMO1P4-201ENST00000453590 386 ntBASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 RPS26P39-201ENST00000469206 341 ntBASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 RPS17P15-201ENST00000475609 349 ntBASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 AC093815.1-201ENST00000508637 280 ntBASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 SEC11B-201ENST00000518383 499 ntBASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 AL121594.2-201ENST00000541658 472 ntBASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 MIR3176-201ENST00000582210 90 ntBASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 AC006115.2-201ENST00000596823 202 ntBASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 AC012467.1-201ENST00000607740 256 ntBASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 MRE11P1-201ENST00000464884 2127 ntBASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
NPIPA3F8WFD2 SRRM1P3-201ENST00000426911 2678 ntBASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 MFSD8-219ENST00000641228 2559 ntBASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NPIPA3F8WFD2 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms