Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 AC012435.1-202ENST00000568772 240 ntBASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 MRPS21P8-201ENST00000569196 235 ntBASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 AL390838.2-201ENST00000602394 274 ntBASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 AC125494.2-201ENST00000602431 657 ntBASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 MIAT_exon5_1.1-201ENST00000618919 149 ntBASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 AC018755.4-201ENST00000619715 454 ntBASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 AC145207.9-201ENST00000623802 325 ntBASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 AC073488.3-201ENST00000631611 778 ntBASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 AC006927.3-201ENST00000638789 384 ntBASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 Z99496.1-201ENST00000469424 1477 ntBASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 HAVCR2-201ENST00000307851 2907 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 TTC28-208ENST00000612946 11274 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 EIF4E3-204ENST00000425534 9949 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.85□□□□□ -1.15
TMEM88BA6NKF7 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 AL354854.1-201ENST00000455940 1363 ntBASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 OR4C1P-202ENST00000641065 1569 ntBASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 MACROD2-202ENST00000378058 4025 ntTSL 2 BASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 DAZ1-202ENST00000405239 4421 ntAPPRIS P5 TSL 1 (best) BASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 CYP8B1-201ENST00000316161 3974 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 SLC10A5P1-201ENST00000379063 1306 ntBASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 JAZF1-201ENST00000283928 3125 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 CD46-208ENST00000367042 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 LINC01814-202ENST00000454224 8839 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 OR52E6-202ENST00000379946 954 ntBASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 Y_RNA.553-201ENST00000384670 102 ntBASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 SNORA26.8-201ENST00000391306 124 ntBASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 SMIM2-201ENST00000400419 822 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 AC136624.1-201ENST00000400791 413 ntBASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 SNORA11C-201ENST00000408532 129 ntBASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 AL663109.1-201ENST00000411498 844 ntBASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 AC006366.1-201ENST00000422002 759 ntBASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 OR5BE1P-201ENST00000425977 939 ntBASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 ATP6V1E1P1-201ENST00000439215 681 ntBASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 RN7SL515P-201ENST00000463999 297 ntBASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 AC066616.1-201ENST00000486795 413 ntBASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 AC036111.2-201ENST00000533247 901 ntBASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 AC004825.1-201ENST00000555068 586 ntBASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 AC092332.1-201ENST00000563684 829 ntBASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 AC074051.3-201ENST00000570238 358 ntBASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 SNORD95-201ENST00000579879 68 ntBASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 MIR1273E-201ENST00000581165 102 ntBASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 AC087752.4-201ENST00000605911 462 ntBASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 AC069209.1-201ENST00000619282 651 ntBASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 FAM27E2-201ENST00000619668 403 ntBASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 OR5BE1P-202ENST00000641168 1176 ntBASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 AC027514.1-201ENST00000588561 1603 ntBASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 AC106872.5-201ENST00000508856 1416 ntBASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 TMC3-AS1-206ENST00000612811 2726 ntBASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 HDAC9-218ENST00000456174 2307 ntTSL 2 BASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
TMEM88BA6NKF7 C9orf131-201ENST00000312292 3409 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.16
TMEM88BA6NKF7 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC7.84□□□□□ -1.16
TMEM88BA6NKF7 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
TMEM88BA6NKF7 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC7.84□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms