Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.58□□□□□ -1.36
CLIP2Q9UDT6 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CLIP2Q9UDT6 AC010740.1-201ENST00000417035 684 ntBASIC6.58□□□□□ -1.36
CLIP2Q9UDT6 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC6.58□□□□□ -1.36
CLIP2Q9UDT6 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.58□□□□□ -1.36
CLIP2Q9UDT6 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.58□□□□□ -1.36
CLIP2Q9UDT6 AC100832.1-201ENST00000471945 383 ntBASIC6.58□□□□□ -1.36
CLIP2Q9UDT6 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC6.58□□□□□ -1.36
CLIP2Q9UDT6 BX510359.5-201ENST00000515651 304 ntBASIC6.58□□□□□ -1.36
CLIP2Q9UDT6 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6.58□□□□□ -1.36
CLIP2Q9UDT6 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.58□□□□□ -1.36
CLIP2Q9UDT6 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.58□□□□□ -1.36
CLIP2Q9UDT6 AC084824.2-201ENST00000548906 345 ntBASIC6.58□□□□□ -1.36
CLIP2Q9UDT6 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CLIP2Q9UDT6 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CLIP2Q9UDT6 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.58□□□□□ -1.36
CLIP2Q9UDT6 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.58□□□□□ -1.36
CLIP2Q9UDT6 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.58□□□□□ -1.36
CLIP2Q9UDT6 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC6.58□□□□□ -1.36
CLIP2Q9UDT6 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC6.58□□□□□ -1.36
CLIP2Q9UDT6 PPATP2-201ENST00000605635 508 ntBASIC6.58□□□□□ -1.36
CLIP2Q9UDT6 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.58□□□□□ -1.36
CLIP2Q9UDT6 AC005840.5-201ENST00000619166 599 ntBASIC6.58□□□□□ -1.36
CLIP2Q9UDT6 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC6.58□□□□□ -1.36
CLIP2Q9UDT6 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.58□□□□□ -1.36
CLIP2Q9UDT6 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CLIP2Q9UDT6 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CLIP2Q9UDT6 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
CLIP2Q9UDT6 AC020633.1-201ENST00000468439 2247 ntBASIC6.58□□□□□ -1.36
CLIP2Q9UDT6 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CLIP2Q9UDT6 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CLIP2Q9UDT6 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CLIP2Q9UDT6 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CLIP2Q9UDT6 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CLIP2Q9UDT6 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.57□□□□□ -1.36
CLIP2Q9UDT6 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC6.57□□□□□ -1.36
CLIP2Q9UDT6 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
CLIP2Q9UDT6 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CLIP2Q9UDT6 AL034546.1-201ENST00000623740 3693 ntBASIC6.57□□□□□ -1.36
CLIP2Q9UDT6 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CLIP2Q9UDT6 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
CLIP2Q9UDT6 GAPDHP24-201ENST00000328713 983 ntBASIC6.57□□□□□ -1.36
CLIP2Q9UDT6 RNA5SP234-201ENST00000363916 119 ntBASIC6.57□□□□□ -1.36
CLIP2Q9UDT6 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
CLIP2Q9UDT6 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.57□□□□□ -1.36
CLIP2Q9UDT6 RPL11P3-201ENST00000395256 523 ntBASIC6.57□□□□□ -1.36
CLIP2Q9UDT6 MIR1178-201ENST00000408396 91 ntBASIC6.57□□□□□ -1.36
CLIP2Q9UDT6 NPM1P18-201ENST00000434232 732 ntBASIC6.57□□□□□ -1.36
CLIP2Q9UDT6 AL161722.1-201ENST00000446972 1032 ntBASIC6.57□□□□□ -1.36
CLIP2Q9UDT6 AC090638.1-201ENST00000498296 909 ntBASIC6.57□□□□□ -1.36
CLIP2Q9UDT6 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC6.57□□□□□ -1.36
CLIP2Q9UDT6 GOLGA5P1-201ENST00000507317 980 ntBASIC6.57□□□□□ -1.36
CLIP2Q9UDT6 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.57□□□□□ -1.36
CLIP2Q9UDT6 RNU6-964P-201ENST00000516524 69 ntBASIC6.57□□□□□ -1.36
CLIP2Q9UDT6 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CLIP2Q9UDT6 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
CLIP2Q9UDT6 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.57□□□□□ -1.36
CLIP2Q9UDT6 AC139697.1-201ENST00000548429 745 ntBASIC6.57□□□□□ -1.36
CLIP2Q9UDT6 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC6.57□□□□□ -1.36
CLIP2Q9UDT6 DHFRP1-201ENST00000579682 559 ntBASIC6.57□□□□□ -1.36
CLIP2Q9UDT6 MIR4311-201ENST00000580794 100 ntBASIC6.57□□□□□ -1.36
CLIP2Q9UDT6 SUGT1P3-202ENST00000604259 383 ntBASIC6.57□□□□□ -1.36
CLIP2Q9UDT6 MIR8080-201ENST00000622224 89 ntBASIC6.57□□□□□ -1.36
CLIP2Q9UDT6 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CLIP2Q9UDT6 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CLIP2Q9UDT6 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
CLIP2Q9UDT6 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CLIP2Q9UDT6 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CLIP2Q9UDT6 AC009962.1-201ENST00000567327 3813 ntBASIC6.57□□□□□ -1.36
CLIP2Q9UDT6 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.57□□□□□ -1.36
CLIP2Q9UDT6 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
CLIP2Q9UDT6 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.56□□□□□ -1.36
CLIP2Q9UDT6 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
CLIP2Q9UDT6 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CLIP2Q9UDT6 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CLIP2Q9UDT6 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
CLIP2Q9UDT6 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CLIP2Q9UDT6 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.56□□□□□ -1.36
CLIP2Q9UDT6 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.56□□□□□ -1.36
CLIP2Q9UDT6 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
CLIP2Q9UDT6 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CLIP2Q9UDT6 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC6.56□□□□□ -1.36
CLIP2Q9UDT6 RN7SKP279-201ENST00000411383 298 ntBASIC6.56□□□□□ -1.36
CLIP2Q9UDT6 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.56□□□□□ -1.36
CLIP2Q9UDT6 MGAT2P2-201ENST00000427194 797 ntBASIC6.56□□□□□ -1.36
CLIP2Q9UDT6 VTI1BP4-201ENST00000427516 527 ntBASIC6.56□□□□□ -1.36
CLIP2Q9UDT6 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.56□□□□□ -1.36
CLIP2Q9UDT6 SERPINA7P1-201ENST00000443077 631 ntBASIC6.56□□□□□ -1.36
CLIP2Q9UDT6 AC023271.1-201ENST00000445936 1090 ntBASIC6.56□□□□□ -1.36
CLIP2Q9UDT6 RN7SL197P-201ENST00000466981 299 ntBASIC6.56□□□□□ -1.36
CLIP2Q9UDT6 UBA52P7-201ENST00000486088 380 ntBASIC6.56□□□□□ -1.36
CLIP2Q9UDT6 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.56□□□□□ -1.36
CLIP2Q9UDT6 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC6.56□□□□□ -1.36
CLIP2Q9UDT6 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.56□□□□□ -1.36
CLIP2Q9UDT6 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC6.56□□□□□ -1.36
CLIP2Q9UDT6 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.56□□□□□ -1.36
CLIP2Q9UDT6 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.56□□□□□ -1.36
CLIP2Q9UDT6 NPM1P45-201ENST00000583151 559 ntBASIC6.56□□□□□ -1.36
CLIP2Q9UDT6 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.56□□□□□ -1.36
CLIP2Q9UDT6 FKBP1AP1-201ENST00000594588 318 ntBASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms