Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
DKK3Q9UBP4 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.13□□□□□ -1.43
DKK3Q9UBP4 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
DKK3Q9UBP4 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
DKK3Q9UBP4 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
DKK3Q9UBP4 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
DKK3Q9UBP4 AC093909.5-201ENST00000621839 1799 ntBASIC6.13□□□□□ -1.43
DKK3Q9UBP4 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.13□□□□□ -1.43
DKK3Q9UBP4 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
DKK3Q9UBP4 AC025470.1-201ENST00000510053 2032 ntBASIC6.13□□□□□ -1.43
DKK3Q9UBP4 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
DKK3Q9UBP4 AC024587.1-201ENST00000505925 2157 ntBASIC6.13□□□□□ -1.43
DKK3Q9UBP4 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
DKK3Q9UBP4 RNU6-249P-201ENST00000363016 102 ntBASIC6.13□□□□□ -1.43
DKK3Q9UBP4 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC6.13□□□□□ -1.43
DKK3Q9UBP4 AP003170.5-201ENST00000397185 335 ntBASIC6.13□□□□□ -1.43
DKK3Q9UBP4 AF228730.1-201ENST00000397972 663 ntBASIC6.13□□□□□ -1.43
DKK3Q9UBP4 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
DKK3Q9UBP4 SSR1P2-201ENST00000415208 787 ntBASIC6.13□□□□□ -1.43
DKK3Q9UBP4 AC007568.1-201ENST00000422912 471 ntBASIC6.13□□□□□ -1.43
DKK3Q9UBP4 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.13□□□□□ -1.43
DKK3Q9UBP4 RRM2P4-201ENST00000441721 562 ntBASIC6.13□□□□□ -1.43
DKK3Q9UBP4 MTATP6P26-201ENST00000445926 662 ntBASIC6.13□□□□□ -1.43
DKK3Q9UBP4 ZNF619P1-201ENST00000446539 752 ntBASIC6.13□□□□□ -1.43
DKK3Q9UBP4 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.13□□□□□ -1.43
DKK3Q9UBP4 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC6.13□□□□□ -1.43
DKK3Q9UBP4 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC6.13□□□□□ -1.43
DKK3Q9UBP4 RPS3AP15-201ENST00000483874 781 ntBASIC6.13□□□□□ -1.43
DKK3Q9UBP4 AC093663.2-201ENST00000484625 313 ntBASIC6.13□□□□□ -1.43
DKK3Q9UBP4 WDR78-207ENST00000488333 613 ntTSL 3 BASIC6.13□□□□□ -1.43
DKK3Q9UBP4 OR2A3P-201ENST00000493774 953 ntBASIC6.13□□□□□ -1.43
DKK3Q9UBP4 AC105233.1-201ENST00000498840 781 ntBASIC6.13□□□□□ -1.43
DKK3Q9UBP4 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.13□□□□□ -1.43
DKK3Q9UBP4 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC6.13□□□□□ -1.43
DKK3Q9UBP4 AC025458.1-201ENST00000506046 166 ntBASIC6.13□□□□□ -1.43
DKK3Q9UBP4 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.13□□□□□ -1.43
DKK3Q9UBP4 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.13□□□□□ -1.43
DKK3Q9UBP4 RNU6-943P-201ENST00000516960 98 ntBASIC6.13□□□□□ -1.43
DKK3Q9UBP4 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC6.13□□□□□ -1.43
DKK3Q9UBP4 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.13□□□□□ -1.43
DKK3Q9UBP4 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC6.13□□□□□ -1.43
DKK3Q9UBP4 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.13□□□□□ -1.43
DKK3Q9UBP4 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
DKK3Q9UBP4 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.13□□□□□ -1.43
DKK3Q9UBP4 AC079905.1-201ENST00000549280 475 ntBASIC6.13□□□□□ -1.43
DKK3Q9UBP4 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
DKK3Q9UBP4 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.13□□□□□ -1.43
DKK3Q9UBP4 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC6.13□□□□□ -1.43
DKK3Q9UBP4 AP005119.1-201ENST00000580956 292 ntBASIC6.13□□□□□ -1.43
DKK3Q9UBP4 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC6.13□□□□□ -1.43
DKK3Q9UBP4 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.13□□□□□ -1.43
DKK3Q9UBP4 AC020916.2-201ENST00000591242 360 ntBASIC6.13□□□□□ -1.43
DKK3Q9UBP4 VN1R81P-201ENST00000602085 372 ntBASIC6.13□□□□□ -1.43
DKK3Q9UBP4 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
DKK3Q9UBP4 AC245389.2-201ENST00000616023 576 ntBASIC6.13□□□□□ -1.43
DKK3Q9UBP4 AC242843.1-201ENST00000618702 573 ntBASIC6.13□□□□□ -1.43
DKK3Q9UBP4 Z99129.2-201ENST00000619967 314 ntBASIC6.13□□□□□ -1.43
DKK3Q9UBP4 AC004836.1-201ENST00000623032 634 ntBASIC6.13□□□□□ -1.43
DKK3Q9UBP4 AC015660.5-201ENST00000623238 564 ntBASIC6.13□□□□□ -1.43
DKK3Q9UBP4 AP003476.1-201ENST00000623984 516 ntBASIC6.13□□□□□ -1.43
DKK3Q9UBP4 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC6.13□□□□□ -1.43
DKK3Q9UBP4 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.13□□□□□ -1.43
DKK3Q9UBP4 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
DKK3Q9UBP4 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
DKK3Q9UBP4 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.13□□□□□ -1.43
DKK3Q9UBP4 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
DKK3Q9UBP4 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
DKK3Q9UBP4 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.13□□□□□ -1.43
DKK3Q9UBP4 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
DKK3Q9UBP4 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
DKK3Q9UBP4 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
DKK3Q9UBP4 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
DKK3Q9UBP4 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
DKK3Q9UBP4 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
DKK3Q9UBP4 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
DKK3Q9UBP4 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
DKK3Q9UBP4 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
DKK3Q9UBP4 RNU6-650P-201ENST00000365658 111 ntBASIC6.12□□□□□ -1.43
DKK3Q9UBP4 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
DKK3Q9UBP4 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
DKK3Q9UBP4 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
DKK3Q9UBP4 AC007068.1-201ENST00000396690 844 ntBASIC6.12□□□□□ -1.43
DKK3Q9UBP4 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC6.12□□□□□ -1.43
DKK3Q9UBP4 AL356968.2-201ENST00000412769 1257 ntBASIC6.12□□□□□ -1.43
DKK3Q9UBP4 HMGA1P8-201ENST00000414130 321 ntBASIC6.12□□□□□ -1.43
DKK3Q9UBP4 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.12□□□□□ -1.43
DKK3Q9UBP4 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
DKK3Q9UBP4 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC6.12□□□□□ -1.43
DKK3Q9UBP4 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.12□□□□□ -1.43
DKK3Q9UBP4 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC6.12□□□□□ -1.43
DKK3Q9UBP4 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC6.12□□□□□ -1.43
DKK3Q9UBP4 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC6.12□□□□□ -1.43
DKK3Q9UBP4 SHQ1P1-201ENST00000437111 1544 ntBASIC6.12□□□□□ -1.43
DKK3Q9UBP4 DNAJA1P5-201ENST00000440278 943 ntBASIC6.12□□□□□ -1.43
DKK3Q9UBP4 AL513321.1-201ENST00000441175 761 ntBASIC6.12□□□□□ -1.43
DKK3Q9UBP4 XKRY2-201ENST00000442362 1093 ntBASIC6.12□□□□□ -1.43
DKK3Q9UBP4 AC079922.1-201ENST00000443291 359 ntBASIC6.12□□□□□ -1.43
DKK3Q9UBP4 AC073072.2-201ENST00000447425 348 ntBASIC6.12□□□□□ -1.43
DKK3Q9UBP4 AC005077.1-201ENST00000449226 375 ntBASIC6.12□□□□□ -1.43
DKK3Q9UBP4 SETP20-201ENST00000457046 852 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms