Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC6.43□□□□□ -1.38
HDAC6Q9UBN7 MTATP6P11-201ENST00000428071 670 ntBASIC6.43□□□□□ -1.38
HDAC6Q9UBN7 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.43□□□□□ -1.38
HDAC6Q9UBN7 AL627308.1-201ENST00000435693 821 ntBASIC6.43□□□□□ -1.38
HDAC6Q9UBN7 CUBNP2-201ENST00000443534 1139 ntBASIC6.43□□□□□ -1.38
HDAC6Q9UBN7 TPRKBP1-201ENST00000456243 481 ntBASIC6.43□□□□□ -1.38
HDAC6Q9UBN7 RPL35AP19-201ENST00000469425 329 ntBASIC6.43□□□□□ -1.38
HDAC6Q9UBN7 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC6.43□□□□□ -1.38
HDAC6Q9UBN7 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.43□□□□□ -1.38
HDAC6Q9UBN7 ATG10-208ENST00000513634 618 ntTSL 2 BASIC6.43□□□□□ -1.38
HDAC6Q9UBN7 snoU109.5-201ENST00000516231 132 ntBASIC6.43□□□□□ -1.38
HDAC6Q9UBN7 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC6.43□□□□□ -1.38
HDAC6Q9UBN7 AC090286.3-201ENST00000573133 187 ntBASIC6.43□□□□□ -1.38
HDAC6Q9UBN7 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.43□□□□□ -1.38
HDAC6Q9UBN7 AC063977.5-201ENST00000601044 974 ntBASIC6.43□□□□□ -1.38
HDAC6Q9UBN7 KATNBL1P1-201ENST00000605192 748 ntBASIC6.43□□□□□ -1.38
HDAC6Q9UBN7 AL023583.1-201ENST00000607518 1143 ntBASIC6.43□□□□□ -1.38
HDAC6Q9UBN7 AC211433.2-201ENST00000608433 387 ntBASIC6.43□□□□□ -1.38
HDAC6Q9UBN7 AC073575.2-201ENST00000614212 627 ntBASIC6.43□□□□□ -1.38
HDAC6Q9UBN7 AL390318.1-201ENST00000624564 687 ntBASIC6.43□□□□□ -1.38
HDAC6Q9UBN7 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HDAC6Q9UBN7 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
HDAC6Q9UBN7 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
HDAC6Q9UBN7 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HDAC6Q9UBN7 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HDAC6Q9UBN7 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
HDAC6Q9UBN7 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HDAC6Q9UBN7 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.42□□□□□ -1.38
HDAC6Q9UBN7 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HDAC6Q9UBN7 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
HDAC6Q9UBN7 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.42□□□□□ -1.38
HDAC6Q9UBN7 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.42□□□□□ -1.38
HDAC6Q9UBN7 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
HDAC6Q9UBN7 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC6.42□□□□□ -1.38
HDAC6Q9UBN7 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HDAC6Q9UBN7 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
HDAC6Q9UBN7 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
HDAC6Q9UBN7 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HDAC6Q9UBN7 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HDAC6Q9UBN7 U3.7-201ENST00000363668 216 ntBASIC6.42□□□□□ -1.38
HDAC6Q9UBN7 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.42□□□□□ -1.38
HDAC6Q9UBN7 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.42□□□□□ -1.38
HDAC6Q9UBN7 DHFRP5-201ENST00000406944 564 ntBASIC6.42□□□□□ -1.38
HDAC6Q9UBN7 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HDAC6Q9UBN7 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC6.42□□□□□ -1.38
HDAC6Q9UBN7 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.42□□□□□ -1.38
HDAC6Q9UBN7 CLUHP1-201ENST00000435012 1190 ntBASIC6.42□□□□□ -1.38
HDAC6Q9UBN7 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.42□□□□□ -1.38
HDAC6Q9UBN7 AC114878.1-201ENST00000441166 358 ntBASIC6.42□□□□□ -1.38
HDAC6Q9UBN7 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC6.42□□□□□ -1.38
HDAC6Q9UBN7 AC017099.1-201ENST00000448261 1028 ntBASIC6.42□□□□□ -1.38
HDAC6Q9UBN7 AL513343.1-201ENST00000451818 792 ntBASIC6.42□□□□□ -1.38
HDAC6Q9UBN7 AC011225.1-201ENST00000457751 369 ntBASIC6.42□□□□□ -1.38
HDAC6Q9UBN7 AL603882.1-201ENST00000463059 681 ntBASIC6.42□□□□□ -1.38
HDAC6Q9UBN7 AC008410.1-201ENST00000483777 339 ntBASIC6.42□□□□□ -1.38
HDAC6Q9UBN7 RPL38P3-201ENST00000484463 213 ntBASIC6.42□□□□□ -1.38
HDAC6Q9UBN7 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC6.42□□□□□ -1.38
HDAC6Q9UBN7 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC6.42□□□□□ -1.38
HDAC6Q9UBN7 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.42□□□□□ -1.38
HDAC6Q9UBN7 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC6.42□□□□□ -1.38
HDAC6Q9UBN7 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.42□□□□□ -1.38
HDAC6Q9UBN7 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.42□□□□□ -1.38
HDAC6Q9UBN7 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC6.42□□□□□ -1.38
HDAC6Q9UBN7 AC016769.4-201ENST00000616893 535 ntBASIC6.42□□□□□ -1.38
HDAC6Q9UBN7 AP000720.1-201ENST00000625091 483 ntBASIC6.42□□□□□ -1.38
HDAC6Q9UBN7 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.42□□□□□ -1.38
HDAC6Q9UBN7 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
HDAC6Q9UBN7 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
HDAC6Q9UBN7 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.42□□□□□ -1.38
HDAC6Q9UBN7 AC022417.1-201ENST00000624768 1303 ntBASIC6.42□□□□□ -1.38
HDAC6Q9UBN7 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HDAC6Q9UBN7 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HDAC6Q9UBN7 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HDAC6Q9UBN7 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
HDAC6Q9UBN7 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HDAC6Q9UBN7 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
HDAC6Q9UBN7 CASC19-248ENST00000641674 1356 ntBASIC6.42□□□□□ -1.38
HDAC6Q9UBN7 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HDAC6Q9UBN7 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
HDAC6Q9UBN7 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HDAC6Q9UBN7 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
HDAC6Q9UBN7 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
HDAC6Q9UBN7 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HDAC6Q9UBN7 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC6.41□□□□□ -1.38
HDAC6Q9UBN7 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HDAC6Q9UBN7 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HDAC6Q9UBN7 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HDAC6Q9UBN7 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
HDAC6Q9UBN7 FTO-203ENST00000460382 1517 ntTSL 5 BASIC6.41□□□□□ -1.38
HDAC6Q9UBN7 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.41□□□□□ -1.38
HDAC6Q9UBN7 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.41□□□□□ -1.38
HDAC6Q9UBN7 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.41□□□□□ -1.38
HDAC6Q9UBN7 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.41□□□□□ -1.38
HDAC6Q9UBN7 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HDAC6Q9UBN7 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HDAC6Q9UBN7 AC016745.2-201ENST00000608834 3443 ntBASIC6.41□□□□□ -1.38
HDAC6Q9UBN7 DPPA2P3-201ENST00000411853 655 ntBASIC6.41□□□□□ -1.38
HDAC6Q9UBN7 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.41□□□□□ -1.38
HDAC6Q9UBN7 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.41□□□□□ -1.38
HDAC6Q9UBN7 AC113412.1-201ENST00000425840 504 ntBASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms