Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC88CQ9P219 AL035090.1-201ENST00000454835 332 ntBASIC5.23□□□□□ -1.57
CCDC88CQ9P219 RNU6-941P-201ENST00000516346 108 ntBASIC5.23□□□□□ -1.57
CCDC88CQ9P219 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC88CQ9P219 AP003080.1-202ENST00000526526 915 ntBASIC5.23□□□□□ -1.57
CCDC88CQ9P219 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC88CQ9P219 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC88CQ9P219 AC007346.2-201ENST00000564816 892 ntBASIC5.23□□□□□ -1.57
CCDC88CQ9P219 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC88CQ9P219 AP000769.2-201ENST00000602344 396 ntBASIC5.23□□□□□ -1.57
CCDC88CQ9P219 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC88CQ9P219 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CCDC88CQ9P219 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC88CQ9P219 AC109446.4-201ENST00000623235 2755 ntBASIC5.23□□□□□ -1.57
CCDC88CQ9P219 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC88CQ9P219 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
CCDC88CQ9P219 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CCDC88CQ9P219 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
CCDC88CQ9P219 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.23□□□□□ -1.57
CCDC88CQ9P219 AC144833.1-201ENST00000567953 4089 ntBASIC5.23□□□□□ -1.57
CCDC88CQ9P219 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CCDC88CQ9P219 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC88CQ9P219 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC88CQ9P219 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CCDC88CQ9P219 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC88CQ9P219 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
CCDC88CQ9P219 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CCDC88CQ9P219 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CCDC88CQ9P219 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC88CQ9P219 CLUHP1-201ENST00000435012 1190 ntBASIC5.23□□□□□ -1.57
CCDC88CQ9P219 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC88CQ9P219 AC005297.1-201ENST00000444765 862 ntBASIC5.23□□□□□ -1.57
CCDC88CQ9P219 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC88CQ9P219 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
CCDC88CQ9P219 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC88CQ9P219 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.23□□□□□ -1.57
CCDC88CQ9P219 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.23□□□□□ -1.57
CCDC88CQ9P219 AC012616.1-201ENST00000600294 197 ntBASIC5.23□□□□□ -1.57
CCDC88CQ9P219 AP002505.2-201ENST00000623585 696 ntBASIC5.23□□□□□ -1.57
CCDC88CQ9P219 CASC19-222ENST00000641321 1173 ntBASIC5.23□□□□□ -1.57
CCDC88CQ9P219 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC5.23□□□□□ -1.57
CCDC88CQ9P219 AC079097.1-201ENST00000512187 1399 ntBASIC5.23□□□□□ -1.57
CCDC88CQ9P219 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CCDC88CQ9P219 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CCDC88CQ9P219 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC88CQ9P219 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC88CQ9P219 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
CCDC88CQ9P219 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.22□□□□□ -1.57
CCDC88CQ9P219 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC88CQ9P219 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.22□□□□□ -1.57
CCDC88CQ9P219 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC88CQ9P219 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC88CQ9P219 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
CCDC88CQ9P219 AC007938.2-201ENST00000604666 2634 ntBASIC5.22□□□□□ -1.57
CCDC88CQ9P219 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC88CQ9P219 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC88CQ9P219 RNA5SP335-201ENST00000363817 110 ntBASIC5.22□□□□□ -1.57
CCDC88CQ9P219 SNORA74A-201ENST00000364089 198 ntBASIC5.22□□□□□ -1.57
CCDC88CQ9P219 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC88CQ9P219 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC88CQ9P219 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.22□□□□□ -1.57
CCDC88CQ9P219 AC099670.2-201ENST00000435130 321 ntBASIC5.22□□□□□ -1.57
CCDC88CQ9P219 LDHAP2-201ENST00000437325 985 ntBASIC5.22□□□□□ -1.57
CCDC88CQ9P219 AC002075.1-201ENST00000457396 676 ntBASIC5.22□□□□□ -1.57
CCDC88CQ9P219 PGAM1P13-201ENST00000507497 754 ntBASIC5.22□□□□□ -1.57
CCDC88CQ9P219 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC88CQ9P219 AC069307.1-201ENST00000602820 447 ntBASIC5.22□□□□□ -1.57
CCDC88CQ9P219 AC018628.1-201ENST00000624147 3819 ntBASIC5.22□□□□□ -1.57
CCDC88CQ9P219 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.22□□□□□ -1.57
CCDC88CQ9P219 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC88CQ9P219 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC88CQ9P219 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.22□□□□□ -1.57
CCDC88CQ9P219 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC88CQ9P219 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
CCDC88CQ9P219 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC88CQ9P219 AC239868.2-201ENST00000564237 4527 ntBASIC5.22□□□□□ -1.57
CCDC88CQ9P219 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC88CQ9P219 AC235565.1-201ENST00000456962 1325 ntBASIC5.22□□□□□ -1.57
CCDC88CQ9P219 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC88CQ9P219 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CCDC88CQ9P219 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
CCDC88CQ9P219 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.57
CCDC88CQ9P219 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
CCDC88CQ9P219 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.21□□□□□ -1.57
CCDC88CQ9P219 DSTNP5-201ENST00000427921 523 ntBASIC5.21□□□□□ -1.57
CCDC88CQ9P219 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.21□□□□□ -1.57
CCDC88CQ9P219 AC105399.1-202ENST00000447303 205 ntBASIC5.21□□□□□ -1.57
CCDC88CQ9P219 RPS4XP14-201ENST00000493072 781 ntBASIC5.21□□□□□ -1.57
CCDC88CQ9P219 AC015864.1-201ENST00000496512 544 ntBASIC5.21□□□□□ -1.57
CCDC88CQ9P219 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.21□□□□□ -1.57
CCDC88CQ9P219 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.21□□□□□ -1.57
CCDC88CQ9P219 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.21□□□□□ -1.57
CCDC88CQ9P219 AC092944.2-201ENST00000605443 889 ntBASIC5.21□□□□□ -1.57
CCDC88CQ9P219 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
CCDC88CQ9P219 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC88CQ9P219 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC88CQ9P219 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.21□□□□□ -1.58
CCDC88CQ9P219 AL592429.1-201ENST00000403909 1473 ntBASIC5.21□□□□□ -1.58
CCDC88CQ9P219 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CCDC88CQ9P219 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms