Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
VAPAQ9P0L0 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.13□□□□□ -1.59
VAPAQ9P0L0 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VAPAQ9P0L0 AC007618.1-201ENST00000366455 732 ntBASIC5.13□□□□□ -1.59
VAPAQ9P0L0 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.13□□□□□ -1.59
VAPAQ9P0L0 RPL12P9-201ENST00000412942 488 ntBASIC5.13□□□□□ -1.59
VAPAQ9P0L0 COX5BP7-201ENST00000414780 274 ntBASIC5.13□□□□□ -1.59
VAPAQ9P0L0 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.13□□□□□ -1.59
VAPAQ9P0L0 OR6D1P-201ENST00000436165 939 ntBASIC5.13□□□□□ -1.59
VAPAQ9P0L0 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.13□□□□□ -1.59
VAPAQ9P0L0 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.13□□□□□ -1.59
VAPAQ9P0L0 AL450023.1-201ENST00000450868 751 ntBASIC5.13□□□□□ -1.59
VAPAQ9P0L0 AL359839.1-201ENST00000451975 1160 ntBASIC5.13□□□□□ -1.59
VAPAQ9P0L0 AL035090.1-201ENST00000454835 332 ntBASIC5.13□□□□□ -1.59
VAPAQ9P0L0 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VAPAQ9P0L0 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.13□□□□□ -1.59
VAPAQ9P0L0 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.13□□□□□ -1.59
VAPAQ9P0L0 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.13□□□□□ -1.59
VAPAQ9P0L0 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.13□□□□□ -1.59
VAPAQ9P0L0 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.13□□□□□ -1.59
VAPAQ9P0L0 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.13□□□□□ -1.59
VAPAQ9P0L0 AC026826.3-201ENST00000561747 158 ntBASIC5.13□□□□□ -1.59
VAPAQ9P0L0 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC5.13□□□□□ -1.59
VAPAQ9P0L0 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.13□□□□□ -1.59
VAPAQ9P0L0 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.13□□□□□ -1.59
VAPAQ9P0L0 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.13□□□□□ -1.59
VAPAQ9P0L0 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.13□□□□□ -1.59
VAPAQ9P0L0 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.13□□□□□ -1.59
VAPAQ9P0L0 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VAPAQ9P0L0 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
VAPAQ9P0L0 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.13□□□□□ -1.59
VAPAQ9P0L0 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VAPAQ9P0L0 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VAPAQ9P0L0 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
VAPAQ9P0L0 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
VAPAQ9P0L0 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
VAPAQ9P0L0 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
VAPAQ9P0L0 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
VAPAQ9P0L0 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VAPAQ9P0L0 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VAPAQ9P0L0 AC007342.5-201ENST00000571340 2142 ntBASIC5.12□□□□□ -1.59
VAPAQ9P0L0 AC079298.1-201ENST00000625026 1619 ntBASIC5.12□□□□□ -1.59
VAPAQ9P0L0 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
VAPAQ9P0L0 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VAPAQ9P0L0 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.12□□□□□ -1.59
VAPAQ9P0L0 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
VAPAQ9P0L0 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.12□□□□□ -1.59
VAPAQ9P0L0 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
VAPAQ9P0L0 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.12□□□□□ -1.59
VAPAQ9P0L0 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
VAPAQ9P0L0 RNA5SP394-201ENST00000364216 119 ntBASIC5.12□□□□□ -1.59
VAPAQ9P0L0 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VAPAQ9P0L0 MIR551A-201ENST00000385042 96 ntBASIC5.12□□□□□ -1.59
VAPAQ9P0L0 DBIP1-201ENST00000401435 260 ntBASIC5.12□□□□□ -1.59
VAPAQ9P0L0 HMGB1P20-201ENST00000402555 677 ntBASIC5.12□□□□□ -1.59
VAPAQ9P0L0 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.12□□□□□ -1.59
VAPAQ9P0L0 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.12□□□□□ -1.59
VAPAQ9P0L0 AKR1B10P1-201ENST00000425765 942 ntBASIC5.12□□□□□ -1.59
VAPAQ9P0L0 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.12□□□□□ -1.59
VAPAQ9P0L0 AL049874.2-201ENST00000492636 288 ntBASIC5.12□□□□□ -1.59
VAPAQ9P0L0 EIF3LP3-201ENST00000495197 822 ntBASIC5.12□□□□□ -1.59
VAPAQ9P0L0 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC5.12□□□□□ -1.59
VAPAQ9P0L0 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.12□□□□□ -1.59
VAPAQ9P0L0 RNU6-615P-201ENST00000516065 106 ntBASIC5.12□□□□□ -1.59
VAPAQ9P0L0 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.12□□□□□ -1.59
VAPAQ9P0L0 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.12□□□□□ -1.59
VAPAQ9P0L0 AC092121.1-201ENST00000569452 202 ntBASIC5.12□□□□□ -1.59
VAPAQ9P0L0 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.12□□□□□ -1.59
VAPAQ9P0L0 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.12□□□□□ -1.59
VAPAQ9P0L0 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.12□□□□□ -1.59
VAPAQ9P0L0 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.12□□□□□ -1.59
VAPAQ9P0L0 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
VAPAQ9P0L0 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VAPAQ9P0L0 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.12□□□□□ -1.59
VAPAQ9P0L0 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VAPAQ9P0L0 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VAPAQ9P0L0 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.12□□□□□ -1.59
VAPAQ9P0L0 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VAPAQ9P0L0 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.11□□□□□ -1.59
VAPAQ9P0L0 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.11□□□□□ -1.59
VAPAQ9P0L0 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
VAPAQ9P0L0 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VAPAQ9P0L0 AC133552.1-201ENST00000569988 4007 ntBASIC5.11□□□□□ -1.59
VAPAQ9P0L0 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.11□□□□□ -1.59
VAPAQ9P0L0 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.11□□□□□ -1.59
VAPAQ9P0L0 OR9K1P-201ENST00000326513 941 ntBASIC5.11□□□□□ -1.59
VAPAQ9P0L0 RN7SKP6-201ENST00000364795 319 ntBASIC5.11□□□□□ -1.59
VAPAQ9P0L0 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VAPAQ9P0L0 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
VAPAQ9P0L0 AC004386.1-201ENST00000393214 761 ntBASIC5.11□□□□□ -1.59
VAPAQ9P0L0 AL445213.1-201ENST00000412589 747 ntBASIC5.11□□□□□ -1.59
VAPAQ9P0L0 AC245060.4-201ENST00000413293 1121 ntBASIC5.11□□□□□ -1.59
VAPAQ9P0L0 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.11□□□□□ -1.59
VAPAQ9P0L0 AL121878.1-201ENST00000418638 859 ntBASIC5.11□□□□□ -1.59
VAPAQ9P0L0 AC113412.1-201ENST00000425840 504 ntBASIC5.11□□□□□ -1.59
VAPAQ9P0L0 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
VAPAQ9P0L0 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.11□□□□□ -1.59
VAPAQ9P0L0 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
VAPAQ9P0L0 GAPDHP14-201ENST00000450472 937 ntBASIC5.11□□□□□ -1.59
VAPAQ9P0L0 ACA64.1-201ENST00000459171 127 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms