Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC6.26□□□□□ -1.41
BLOC1S4Q9NUP1 AL451049.1-201ENST00000608672 497 ntBASIC6.26□□□□□ -1.41
BLOC1S4Q9NUP1 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC6.26□□□□□ -1.41
BLOC1S4Q9NUP1 AC009032.1-201ENST00000617574 431 ntBASIC6.26□□□□□ -1.41
BLOC1S4Q9NUP1 AC020763.5-201ENST00000623298 430 ntBASIC6.26□□□□□ -1.41
BLOC1S4Q9NUP1 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC6.26□□□□□ -1.41
BLOC1S4Q9NUP1 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.26□□□□□ -1.41
BLOC1S4Q9NUP1 AL034546.1-201ENST00000623740 3693 ntBASIC6.26□□□□□ -1.41
BLOC1S4Q9NUP1 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
BLOC1S4Q9NUP1 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
BLOC1S4Q9NUP1 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
BLOC1S4Q9NUP1 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
BLOC1S4Q9NUP1 AC087516.1-201ENST00000561236 2428 ntBASIC6.26□□□□□ -1.41
BLOC1S4Q9NUP1 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.26□□□□□ -1.41
BLOC1S4Q9NUP1 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
BLOC1S4Q9NUP1 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
BLOC1S4Q9NUP1 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
BLOC1S4Q9NUP1 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.25□□□□□ -1.41
BLOC1S4Q9NUP1 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
BLOC1S4Q9NUP1 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.25□□□□□ -1.41
BLOC1S4Q9NUP1 AC025470.1-201ENST00000510053 2032 ntBASIC6.25□□□□□ -1.41
BLOC1S4Q9NUP1 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
BLOC1S4Q9NUP1 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC6.25□□□□□ -1.41
BLOC1S4Q9NUP1 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
BLOC1S4Q9NUP1 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
BLOC1S4Q9NUP1 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC6.25□□□□□ -1.41
BLOC1S4Q9NUP1 RN7SKP185-201ENST00000362813 326 ntBASIC6.25□□□□□ -1.41
BLOC1S4Q9NUP1 RNA5SP284-201ENST00000384547 118 ntBASIC6.25□□□□□ -1.41
BLOC1S4Q9NUP1 RMRPP5-201ENST00000411156 267 ntBASIC6.25□□□□□ -1.41
BLOC1S4Q9NUP1 RPSAP35-201ENST00000413753 818 ntBASIC6.25□□□□□ -1.41
BLOC1S4Q9NUP1 AL596448.1-201ENST00000415024 392 ntBASIC6.25□□□□□ -1.41
BLOC1S4Q9NUP1 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC6.25□□□□□ -1.41
BLOC1S4Q9NUP1 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC6.25□□□□□ -1.41
BLOC1S4Q9NUP1 AC113412.1-201ENST00000425840 504 ntBASIC6.25□□□□□ -1.41
BLOC1S4Q9NUP1 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC6.25□□□□□ -1.41
BLOC1S4Q9NUP1 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC6.25□□□□□ -1.41
BLOC1S4Q9NUP1 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC6.25□□□□□ -1.41
BLOC1S4Q9NUP1 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC6.25□□□□□ -1.41
BLOC1S4Q9NUP1 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.25□□□□□ -1.41
BLOC1S4Q9NUP1 VN1R48P-201ENST00000448149 1036 ntBASIC6.25□□□□□ -1.41
BLOC1S4Q9NUP1 AZGP1P2-201ENST00000454506 345 ntBASIC6.25□□□□□ -1.41
BLOC1S4Q9NUP1 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC6.25□□□□□ -1.41
BLOC1S4Q9NUP1 RNU6-491P-201ENST00000516099 110 ntBASIC6.25□□□□□ -1.41
BLOC1S4Q9NUP1 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.25□□□□□ -1.41
BLOC1S4Q9NUP1 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.25□□□□□ -1.41
BLOC1S4Q9NUP1 AC125494.2-201ENST00000602431 657 ntBASIC6.25□□□□□ -1.41
BLOC1S4Q9NUP1 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.25□□□□□ -1.41
BLOC1S4Q9NUP1 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC6.25□□□□□ -1.41
BLOC1S4Q9NUP1 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.25□□□□□ -1.41
BLOC1S4Q9NUP1 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC6.25□□□□□ -1.41
BLOC1S4Q9NUP1 BANCR-201ENST00000624238 473 ntTSL 2 BASIC6.25□□□□□ -1.41
BLOC1S4Q9NUP1 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.25□□□□□ -1.41
BLOC1S4Q9NUP1 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC6.25□□□□□ -1.41
BLOC1S4Q9NUP1 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.25□□□□□ -1.41
BLOC1S4Q9NUP1 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
BLOC1S4Q9NUP1 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.25□□□□□ -1.41
BLOC1S4Q9NUP1 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
BLOC1S4Q9NUP1 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.25□□□□□ -1.41
BLOC1S4Q9NUP1 LINC02019-201ENST00000608605 2060 ntBASIC6.25□□□□□ -1.41
BLOC1S4Q9NUP1 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
BLOC1S4Q9NUP1 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
BLOC1S4Q9NUP1 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
BLOC1S4Q9NUP1 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
BLOC1S4Q9NUP1 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.25□□□□□ -1.41
BLOC1S4Q9NUP1 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
BLOC1S4Q9NUP1 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
BLOC1S4Q9NUP1 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.25□□□□□ -1.41
BLOC1S4Q9NUP1 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
BLOC1S4Q9NUP1 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
BLOC1S4Q9NUP1 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
BLOC1S4Q9NUP1 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
BLOC1S4Q9NUP1 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
BLOC1S4Q9NUP1 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
BLOC1S4Q9NUP1 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
BLOC1S4Q9NUP1 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.24□□□□□ -1.41
BLOC1S4Q9NUP1 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
BLOC1S4Q9NUP1 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.24□□□□□ -1.41
BLOC1S4Q9NUP1 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC6.24□□□□□ -1.41
BLOC1S4Q9NUP1 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.24□□□□□ -1.41
BLOC1S4Q9NUP1 RN7SKP15-201ENST00000364742 309 ntBASIC6.24□□□□□ -1.41
BLOC1S4Q9NUP1 AL009179.1-201ENST00000406085 265 ntBASIC6.24□□□□□ -1.41
BLOC1S4Q9NUP1 MTND3P20-201ENST00000407663 186 ntBASIC6.24□□□□□ -1.41
BLOC1S4Q9NUP1 BMS1P17-202ENST00000416720 316 ntBASIC6.24□□□□□ -1.41
BLOC1S4Q9NUP1 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6.24□□□□□ -1.41
BLOC1S4Q9NUP1 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.24□□□□□ -1.41
BLOC1S4Q9NUP1 TRIM60P13-201ENST00000432350 1283 ntBASIC6.24□□□□□ -1.41
BLOC1S4Q9NUP1 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
BLOC1S4Q9NUP1 AC046176.1-201ENST00000435260 1170 ntBASIC6.24□□□□□ -1.41
BLOC1S4Q9NUP1 AL450023.1-201ENST00000450868 751 ntBASIC6.24□□□□□ -1.41
BLOC1S4Q9NUP1 VDAC2P4-201ENST00000452925 711 ntBASIC6.24□□□□□ -1.41
BLOC1S4Q9NUP1 RPSAP39-201ENST00000467439 883 ntBASIC6.24□□□□□ -1.41
BLOC1S4Q9NUP1 ATP5LP5-201ENST00000483050 299 ntBASIC6.24□□□□□ -1.41
BLOC1S4Q9NUP1 AC138866.2-201ENST00000508650 584 ntBASIC6.24□□□□□ -1.41
BLOC1S4Q9NUP1 CYCSP22-201ENST00000517555 339 ntBASIC6.24□□□□□ -1.41
BLOC1S4Q9NUP1 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.24□□□□□ -1.41
BLOC1S4Q9NUP1 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.24□□□□□ -1.41
BLOC1S4Q9NUP1 EIF4A2P3-201ENST00000525903 1055 ntBASIC6.24□□□□□ -1.41
BLOC1S4Q9NUP1 PMS2P3-207ENST00000529061 717 ntBASIC6.24□□□□□ -1.41
BLOC1S4Q9NUP1 TRIM51DP-201ENST00000529746 596 ntBASIC6.24□□□□□ -1.41
BLOC1S4Q9NUP1 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms