Protein–RNA interactions for Protein: Q9NSA3

CTNNBIP1, Beta-catenin-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNBIP1Q9NSA3 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 BMS1P3-201ENST00000372011 932 ntBASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 OR1L6-202ENST00000373684 1044 ntBASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 GCNT1P4-201ENST00000404096 329 ntBASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 RNA5SP431-201ENST00000410312 120 ntBASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 PCNPP4-201ENST00000414817 517 ntBASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 AC013268.2-201ENST00000420753 337 ntBASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 BX284632.2-201ENST00000421091 399 ntBASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 AL512605.1-202ENST00000441919 381 ntBASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 AL359955.2-201ENST00000445380 353 ntBASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 AC023194.2-201ENST00000465398 406 ntBASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 AC005165.2-201ENST00000466070 380 ntBASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 RPS17P15-201ENST00000475609 349 ntBASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 AC020779.1-201ENST00000478757 796 ntBASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 AC009120.1-201ENST00000493458 473 ntBASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 AC011411.1-201ENST00000509592 876 ntBASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 NACAP5-201ENST00000509863 636 ntBASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 GUSBP9-201ENST00000510138 584 ntBASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 RNU2-45P-201ENST00000516068 187 ntBASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 RN7SKP5-201ENST00000517045 272 ntBASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 CDC42P3-201ENST00000518493 633 ntBASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 AC010547.7-201ENST00000570323 333 ntBASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 MIR4675-201ENST00000577898 77 ntBASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 AC009237.13-201ENST00000603193 276 ntBASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 AC022001.1-201ENST00000605193 268 ntBASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 AL139041.1-201ENST00000605480 610 ntBASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 AC007204.1-201ENST00000621794 555 ntBASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 AC091932.2-201ENST00000623014 291 ntBASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 5S_rRNA.29-201ENST00000641250 107 ntBASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 AC100757.1-201ENST00000616872 1835 ntBASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 CR382285.2-201ENST00000624662 1495 ntBASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CTNNBIP1Q9NSA3 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CTNNBIP1Q9NSA3 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CTNNBIP1Q9NSA3 AC022417.1-201ENST00000624768 1303 ntBASIC4.47□□□□□ -1.69
CTNNBIP1Q9NSA3 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.47□□□□□ -1.69
CTNNBIP1Q9NSA3 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.47□□□□□ -1.69
CTNNBIP1Q9NSA3 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
CTNNBIP1Q9NSA3 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CTNNBIP1Q9NSA3 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CTNNBIP1Q9NSA3 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
CTNNBIP1Q9NSA3 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC4.47□□□□□ -1.69
CTNNBIP1Q9NSA3 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.47□□□□□ -1.69
CTNNBIP1Q9NSA3 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CTNNBIP1Q9NSA3 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CTNNBIP1Q9NSA3 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CTNNBIP1Q9NSA3 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CTNNBIP1Q9NSA3 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CTNNBIP1Q9NSA3 OR9K1P-201ENST00000326513 941 ntBASIC4.47□□□□□ -1.69
CTNNBIP1Q9NSA3 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.47□□□□□ -1.69
CTNNBIP1Q9NSA3 RNA5SP30-201ENST00000365552 115 ntBASIC4.47□□□□□ -1.69
CTNNBIP1Q9NSA3 RNU6-729P-201ENST00000384399 107 ntBASIC4.47□□□□□ -1.69
CTNNBIP1Q9NSA3 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CTNNBIP1Q9NSA3 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CTNNBIP1Q9NSA3 NENFP1-201ENST00000419476 466 ntBASIC4.47□□□□□ -1.69
CTNNBIP1Q9NSA3 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4.47□□□□□ -1.69
CTNNBIP1Q9NSA3 Z82198.3-201ENST00000421145 199 ntBASIC4.47□□□□□ -1.69
CTNNBIP1Q9NSA3 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CTNNBIP1Q9NSA3 AC017019.1-201ENST00000426129 261 ntBASIC4.47□□□□□ -1.69
CTNNBIP1Q9NSA3 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.47□□□□□ -1.69
CTNNBIP1Q9NSA3 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC4.47□□□□□ -1.69
CTNNBIP1Q9NSA3 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
CTNNBIP1Q9NSA3 RPL19P16-201ENST00000433839 588 ntBASIC4.47□□□□□ -1.69
CTNNBIP1Q9NSA3 ATP6V1E1P1-201ENST00000439215 681 ntBASIC4.47□□□□□ -1.69
CTNNBIP1Q9NSA3 AL450263.2-201ENST00000439400 589 ntBASIC4.47□□□□□ -1.69
CTNNBIP1Q9NSA3 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC4.47□□□□□ -1.69
CTNNBIP1Q9NSA3 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC4.47□□□□□ -1.69
CTNNBIP1Q9NSA3 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC4.47□□□□□ -1.69
CTNNBIP1Q9NSA3 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CTNNBIP1Q9NSA3 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC4.47□□□□□ -1.69
CTNNBIP1Q9NSA3 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms