Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.89□□□□□ -1.47
NXF3Q9H4D5 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NXF3Q9H4D5 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.89□□□□□ -1.47
NXF3Q9H4D5 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NXF3Q9H4D5 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.89□□□□□ -1.47
NXF3Q9H4D5 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
NXF3Q9H4D5 SNORA58B-201ENST00000364259 136 ntBASIC5.89□□□□□ -1.47
NXF3Q9H4D5 U3.10-201ENST00000364459 214 ntBASIC5.89□□□□□ -1.47
NXF3Q9H4D5 RNU1-149P-201ENST00000390870 161 ntBASIC5.89□□□□□ -1.47
NXF3Q9H4D5 AC007394.1-201ENST00000421941 531 ntBASIC5.89□□□□□ -1.47
NXF3Q9H4D5 RIMKLBP2-201ENST00000424737 654 ntBASIC5.89□□□□□ -1.47
NXF3Q9H4D5 AC021876.1-201ENST00000425959 359 ntBASIC5.89□□□□□ -1.47
NXF3Q9H4D5 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.89□□□□□ -1.47
NXF3Q9H4D5 IGBP1P3-201ENST00000447449 1000 ntBASIC5.89□□□□□ -1.47
NXF3Q9H4D5 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.89□□□□□ -1.47
NXF3Q9H4D5 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NXF3Q9H4D5 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.89□□□□□ -1.47
NXF3Q9H4D5 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.89□□□□□ -1.47
NXF3Q9H4D5 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
NXF3Q9H4D5 HAUS8P1-201ENST00000549005 542 ntBASIC5.89□□□□□ -1.47
NXF3Q9H4D5 HNRNPCP1-201ENST00000556181 766 ntBASIC5.89□□□□□ -1.47
NXF3Q9H4D5 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.89□□□□□ -1.47
NXF3Q9H4D5 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.89□□□□□ -1.47
NXF3Q9H4D5 AC060766.1-201ENST00000590824 627 ntBASIC5.89□□□□□ -1.47
NXF3Q9H4D5 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.89□□□□□ -1.47
NXF3Q9H4D5 WBP1LP8-201ENST00000617401 327 ntBASIC5.89□□□□□ -1.47
NXF3Q9H4D5 AC009120.7-201ENST00000623452 780 ntBASIC5.89□□□□□ -1.47
NXF3Q9H4D5 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NXF3Q9H4D5 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
NXF3Q9H4D5 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.89□□□□□ -1.47
NXF3Q9H4D5 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
NXF3Q9H4D5 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NXF3Q9H4D5 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NXF3Q9H4D5 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
NXF3Q9H4D5 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NXF3Q9H4D5 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NXF3Q9H4D5 AL449283.1-201ENST00000602631 3403 ntBASIC5.89□□□□□ -1.47
NXF3Q9H4D5 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
NXF3Q9H4D5 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
NXF3Q9H4D5 AL078595.2-201ENST00000605309 1780 ntBASIC5.88□□□□□ -1.47
NXF3Q9H4D5 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
NXF3Q9H4D5 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
NXF3Q9H4D5 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.88□□□□□ -1.47
NXF3Q9H4D5 SNORA67-201ENST00000384423 137 ntBASIC5.88□□□□□ -1.47
NXF3Q9H4D5 SNORA70-201ENST00000384436 135 ntBASIC5.88□□□□□ -1.47
NXF3Q9H4D5 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.88□□□□□ -1.47
NXF3Q9H4D5 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
NXF3Q9H4D5 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NXF3Q9H4D5 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.88□□□□□ -1.47
NXF3Q9H4D5 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.88□□□□□ -1.47
NXF3Q9H4D5 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.88□□□□□ -1.47
NXF3Q9H4D5 SNORD125-201ENST00000459538 96 ntBASIC5.88□□□□□ -1.47
NXF3Q9H4D5 AC008410.1-201ENST00000483777 339 ntBASIC5.88□□□□□ -1.47
NXF3Q9H4D5 RPL32P9-201ENST00000487963 407 ntBASIC5.88□□□□□ -1.47
NXF3Q9H4D5 AC109464.1-201ENST00000511091 819 ntBASIC5.88□□□□□ -1.47
NXF3Q9H4D5 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.88□□□□□ -1.47
NXF3Q9H4D5 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.88□□□□□ -1.47
NXF3Q9H4D5 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.88□□□□□ -1.47
NXF3Q9H4D5 NMNAT1P5-201ENST00000559657 841 ntBASIC5.88□□□□□ -1.47
NXF3Q9H4D5 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.88□□□□□ -1.47
NXF3Q9H4D5 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.88□□□□□ -1.47
NXF3Q9H4D5 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.88□□□□□ -1.47
NXF3Q9H4D5 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.88□□□□□ -1.47
NXF3Q9H4D5 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.88□□□□□ -1.47
NXF3Q9H4D5 SAMMSON-210ENST00000641260 1308 ntBASIC5.88□□□□□ -1.47
NXF3Q9H4D5 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NXF3Q9H4D5 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NXF3Q9H4D5 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NXF3Q9H4D5 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
NXF3Q9H4D5 OR55B1P-203ENST00000641518 2602 ntBASIC5.88□□□□□ -1.47
NXF3Q9H4D5 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NXF3Q9H4D5 Z95114.1-201ENST00000624264 14574 ntBASIC5.88□□□□□ -1.47
NXF3Q9H4D5 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
NXF3Q9H4D5 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.87□□□□□ -1.47
NXF3Q9H4D5 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
NXF3Q9H4D5 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
NXF3Q9H4D5 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NXF3Q9H4D5 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NXF3Q9H4D5 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
NXF3Q9H4D5 AC232271.1-201ENST00000602455 2715 ntBASIC5.87□□□□□ -1.47
NXF3Q9H4D5 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
NXF3Q9H4D5 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
NXF3Q9H4D5 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
NXF3Q9H4D5 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
NXF3Q9H4D5 RPL23P2-201ENST00000320371 421 ntBASIC5.87□□□□□ -1.47
NXF3Q9H4D5 NPM1P38-201ENST00000403835 865 ntBASIC5.87□□□□□ -1.47
NXF3Q9H4D5 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.87□□□□□ -1.47
NXF3Q9H4D5 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.87□□□□□ -1.47
NXF3Q9H4D5 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.87□□□□□ -1.47
NXF3Q9H4D5 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
NXF3Q9H4D5 RPL7P6-201ENST00000480903 738 ntBASIC5.87□□□□□ -1.47
NXF3Q9H4D5 AC093270.2-201ENST00000486157 792 ntBASIC5.87□□□□□ -1.47
NXF3Q9H4D5 RN7SL808P-201ENST00000496066 299 ntBASIC5.87□□□□□ -1.47
NXF3Q9H4D5 AC015864.1-201ENST00000496512 544 ntBASIC5.87□□□□□ -1.47
NXF3Q9H4D5 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
NXF3Q9H4D5 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.87□□□□□ -1.47
NXF3Q9H4D5 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.87□□□□□ -1.47
NXF3Q9H4D5 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.87□□□□□ -1.47
NXF3Q9H4D5 AC127381.1-201ENST00000555979 939 ntBASIC5.87□□□□□ -1.47
NXF3Q9H4D5 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms