Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.73□□□□□ -1.49
TRIM4Q9C037 AC130365.2-201ENST00000525882 1201 ntBASIC5.73□□□□□ -1.49
TRIM4Q9C037 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM4Q9C037 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.73□□□□□ -1.49
TRIM4Q9C037 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.73□□□□□ -1.49
TRIM4Q9C037 AC119403.2-201ENST00000590960 598 ntBASIC5.73□□□□□ -1.49
TRIM4Q9C037 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.73□□□□□ -1.49
TRIM4Q9C037 AC079395.2-201ENST00000610982 737 ntBASIC5.73□□□□□ -1.49
TRIM4Q9C037 AL122125.1-201ENST00000616999 600 ntBASIC5.73□□□□□ -1.49
TRIM4Q9C037 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.73□□□□□ -1.49
TRIM4Q9C037 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.73□□□□□ -1.49
TRIM4Q9C037 CASC19-222ENST00000641321 1173 ntBASIC5.73□□□□□ -1.49
TRIM4Q9C037 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
TRIM4Q9C037 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM4Q9C037 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM4Q9C037 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM4Q9C037 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM4Q9C037 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM4Q9C037 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM4Q9C037 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
TRIM4Q9C037 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
TRIM4Q9C037 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
TRIM4Q9C037 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.73□□□□□ -1.49
TRIM4Q9C037 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM4Q9C037 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM4Q9C037 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM4Q9C037 RNA5SP375-201ENST00000362975 119 ntBASIC5.72□□□□□ -1.49
TRIM4Q9C037 AL132875.1-201ENST00000403623 949 ntBASIC5.72□□□□□ -1.49
TRIM4Q9C037 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.72□□□□□ -1.49
TRIM4Q9C037 MIR1203-201ENST00000408812 85 ntBASIC5.72□□□□□ -1.49
TRIM4Q9C037 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.72□□□□□ -1.49
TRIM4Q9C037 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.72□□□□□ -1.49
TRIM4Q9C037 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.72□□□□□ -1.49
TRIM4Q9C037 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.72□□□□□ -1.49
TRIM4Q9C037 H2AFZP6-201ENST00000444403 394 ntBASIC5.72□□□□□ -1.49
TRIM4Q9C037 AL162739.1-201ENST00000450606 307 ntBASIC5.72□□□□□ -1.49
TRIM4Q9C037 CBX1P2-201ENST00000453841 458 ntBASIC5.72□□□□□ -1.49
TRIM4Q9C037 SIAH1P1-201ENST00000479411 923 ntBASIC5.72□□□□□ -1.49
TRIM4Q9C037 RN7SL193P-201ENST00000491708 276 ntBASIC5.72□□□□□ -1.49
TRIM4Q9C037 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.72□□□□□ -1.49
TRIM4Q9C037 TOMM22P4-201ENST00000511318 336 ntBASIC5.72□□□□□ -1.49
TRIM4Q9C037 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.72□□□□□ -1.49
TRIM4Q9C037 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.72□□□□□ -1.49
TRIM4Q9C037 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.72□□□□□ -1.49
TRIM4Q9C037 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.72□□□□□ -1.49
TRIM4Q9C037 SETP1-201ENST00000556014 845 ntBASIC5.72□□□□□ -1.49
TRIM4Q9C037 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.72□□□□□ -1.49
TRIM4Q9C037 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.72□□□□□ -1.49
TRIM4Q9C037 MIR4472-2-201ENST00000582069 67 ntBASIC5.72□□□□□ -1.49
TRIM4Q9C037 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.72□□□□□ -1.49
TRIM4Q9C037 Mico1.1-201ENST00000611698 204 ntBASIC5.72□□□□□ -1.49
TRIM4Q9C037 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.72□□□□□ -1.49
TRIM4Q9C037 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
TRIM4Q9C037 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM4Q9C037 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
TRIM4Q9C037 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
TRIM4Q9C037 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM4Q9C037 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM4Q9C037 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.72□□□□□ -1.49
TRIM4Q9C037 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TRIM4Q9C037 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
TRIM4Q9C037 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.71□□□□□ -1.49
TRIM4Q9C037 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
TRIM4Q9C037 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
TRIM4Q9C037 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
TRIM4Q9C037 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
TRIM4Q9C037 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.71□□□□□ -1.49
TRIM4Q9C037 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.71□□□□□ -1.5
TRIM4Q9C037 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.71□□□□□ -1.5
TRIM4Q9C037 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
TRIM4Q9C037 THAP12P5-201ENST00000405864 2275 ntBASIC5.71□□□□□ -1.5
TRIM4Q9C037 AC021242.1-201ENST00000507315 2035 ntBASIC5.71□□□□□ -1.5
TRIM4Q9C037 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.71□□□□□ -1.5
TRIM4Q9C037 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM4Q9C037 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM4Q9C037 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.71□□□□□ -1.5
TRIM4Q9C037 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM4Q9C037 SNORA70.6-201ENST00000383934 134 ntBASIC5.71□□□□□ -1.5
TRIM4Q9C037 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.71□□□□□ -1.5
TRIM4Q9C037 RPL37P18-201ENST00000411602 243 ntBASIC5.71□□□□□ -1.5
TRIM4Q9C037 AC245096.1-201ENST00000413104 546 ntBASIC5.71□□□□□ -1.5
TRIM4Q9C037 NPM1P4-201ENST00000414095 812 ntBASIC5.71□□□□□ -1.5
TRIM4Q9C037 RPS15AP30-201ENST00000420976 390 ntBASIC5.71□□□□□ -1.5
TRIM4Q9C037 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.71□□□□□ -1.5
TRIM4Q9C037 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.71□□□□□ -1.5
TRIM4Q9C037 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.71□□□□□ -1.5
TRIM4Q9C037 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TRIM4Q9C037 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.71□□□□□ -1.5
TRIM4Q9C037 AC073850.1-201ENST00000449243 255 ntBASIC5.71□□□□□ -1.5
TRIM4Q9C037 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.71□□□□□ -1.5
TRIM4Q9C037 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.71□□□□□ -1.5
TRIM4Q9C037 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.71□□□□□ -1.5
TRIM4Q9C037 DUTP7-201ENST00000507982 486 ntBASIC5.71□□□□□ -1.5
TRIM4Q9C037 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.71□□□□□ -1.5
TRIM4Q9C037 OR10D4P-201ENST00000525892 951 ntBASIC5.71□□□□□ -1.5
TRIM4Q9C037 AC021269.1-201ENST00000526860 705 ntBASIC5.71□□□□□ -1.5
TRIM4Q9C037 OR8A2P-201ENST00000528631 952 ntBASIC5.71□□□□□ -1.5
TRIM4Q9C037 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.71□□□□□ -1.5
TRIM4Q9C037 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.71□□□□□ -1.5
TRIM4Q9C037 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms