Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AL353796.1-201ENST00000561542 3241 ntBASIC6.59□□□□□ -1.36
UPF3BQ9BZI7 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
UPF3BQ9BZI7 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
UPF3BQ9BZI7 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
UPF3BQ9BZI7 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.59□□□□□ -1.36
UPF3BQ9BZI7 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.58□□□□□ -1.36
UPF3BQ9BZI7 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
UPF3BQ9BZI7 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
UPF3BQ9BZI7 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
UPF3BQ9BZI7 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
UPF3BQ9BZI7 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
UPF3BQ9BZI7 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
UPF3BQ9BZI7 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
UPF3BQ9BZI7 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
UPF3BQ9BZI7 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.58□□□□□ -1.36
UPF3BQ9BZI7 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
UPF3BQ9BZI7 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
UPF3BQ9BZI7 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
UPF3BQ9BZI7 MT-RNR2-201ENST00000387347 1559 ntBASIC6.58□□□□□ -1.36
UPF3BQ9BZI7 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.58□□□□□ -1.36
UPF3BQ9BZI7 MIR375-201ENST00000362103 64 ntBASIC6.58□□□□□ -1.36
UPF3BQ9BZI7 RN7SKP186-201ENST00000365371 303 ntBASIC6.58□□□□□ -1.36
UPF3BQ9BZI7 RNA5SP131-201ENST00000365452 119 ntBASIC6.58□□□□□ -1.36
UPF3BQ9BZI7 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.58□□□□□ -1.36
UPF3BQ9BZI7 SPTLC1P2-201ENST00000407089 121 ntBASIC6.58□□□□□ -1.36
UPF3BQ9BZI7 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.58□□□□□ -1.36
UPF3BQ9BZI7 RIMKLBP2-201ENST00000424737 654 ntBASIC6.58□□□□□ -1.36
UPF3BQ9BZI7 RPS27AP6-201ENST00000427962 448 ntBASIC6.58□□□□□ -1.36
UPF3BQ9BZI7 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.58□□□□□ -1.36
UPF3BQ9BZI7 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC6.58□□□□□ -1.36
UPF3BQ9BZI7 IGBP1P3-201ENST00000447449 1000 ntBASIC6.58□□□□□ -1.36
UPF3BQ9BZI7 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.58□□□□□ -1.36
UPF3BQ9BZI7 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
UPF3BQ9BZI7 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.58□□□□□ -1.36
UPF3BQ9BZI7 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.58□□□□□ -1.36
UPF3BQ9BZI7 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.58□□□□□ -1.36
UPF3BQ9BZI7 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC6.58□□□□□ -1.36
UPF3BQ9BZI7 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC6.58□□□□□ -1.36
UPF3BQ9BZI7 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.58□□□□□ -1.36
UPF3BQ9BZI7 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.58□□□□□ -1.36
UPF3BQ9BZI7 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC6.58□□□□□ -1.36
UPF3BQ9BZI7 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC6.58□□□□□ -1.36
UPF3BQ9BZI7 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC6.58□□□□□ -1.36
UPF3BQ9BZI7 AP000769.2-201ENST00000602344 396 ntBASIC6.58□□□□□ -1.36
UPF3BQ9BZI7 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
UPF3BQ9BZI7 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
UPF3BQ9BZI7 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
UPF3BQ9BZI7 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.58□□□□□ -1.36
UPF3BQ9BZI7 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
UPF3BQ9BZI7 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.58□□□□□ -1.36
UPF3BQ9BZI7 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.58□□□□□ -1.36
UPF3BQ9BZI7 AL034546.1-201ENST00000623740 3693 ntBASIC6.58□□□□□ -1.36
UPF3BQ9BZI7 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
UPF3BQ9BZI7 AP001029.2-203ENST00000589795 4910 ntBASIC6.58□□□□□ -1.36
UPF3BQ9BZI7 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
UPF3BQ9BZI7 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
UPF3BQ9BZI7 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
UPF3BQ9BZI7 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
UPF3BQ9BZI7 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.57□□□□□ -1.36
UPF3BQ9BZI7 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.57□□□□□ -1.36
UPF3BQ9BZI7 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC6.57□□□□□ -1.36
UPF3BQ9BZI7 AL662874.1-201ENST00000426065 230 ntBASIC6.57□□□□□ -1.36
UPF3BQ9BZI7 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.57□□□□□ -1.36
UPF3BQ9BZI7 NPM1P22-201ENST00000427761 952 ntBASIC6.57□□□□□ -1.36
UPF3BQ9BZI7 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC6.57□□□□□ -1.36
UPF3BQ9BZI7 TAAR4P-201ENST00000454843 1039 ntBASIC6.57□□□□□ -1.36
UPF3BQ9BZI7 RN7SL799P-201ENST00000475891 298 ntBASIC6.57□□□□□ -1.36
UPF3BQ9BZI7 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.57□□□□□ -1.36
UPF3BQ9BZI7 AC091912.1-201ENST00000511351 248 ntBASIC6.57□□□□□ -1.36
UPF3BQ9BZI7 RNU6-615P-201ENST00000516065 106 ntBASIC6.57□□□□□ -1.36
UPF3BQ9BZI7 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC6.57□□□□□ -1.36
UPF3BQ9BZI7 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC6.57□□□□□ -1.36
UPF3BQ9BZI7 AC007342.5-201ENST00000571340 2142 ntBASIC6.57□□□□□ -1.36
UPF3BQ9BZI7 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.57□□□□□ -1.36
UPF3BQ9BZI7 AC018445.2-201ENST00000622987 260 ntBASIC6.57□□□□□ -1.36
UPF3BQ9BZI7 AL691477.1-201ENST00000624398 162 ntBASIC6.57□□□□□ -1.36
UPF3BQ9BZI7 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC6.57□□□□□ -1.36
UPF3BQ9BZI7 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.57□□□□□ -1.36
UPF3BQ9BZI7 CASC19-222ENST00000641321 1173 ntBASIC6.57□□□□□ -1.36
UPF3BQ9BZI7 AP001157.1-201ENST00000550837 2339 ntBASIC6.57□□□□□ -1.36
UPF3BQ9BZI7 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.57□□□□□ -1.36
UPF3BQ9BZI7 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
UPF3BQ9BZI7 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
UPF3BQ9BZI7 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
UPF3BQ9BZI7 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
UPF3BQ9BZI7 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
UPF3BQ9BZI7 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
UPF3BQ9BZI7 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC6.57□□□□□ -1.36
UPF3BQ9BZI7 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
UPF3BQ9BZI7 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.57□□□□□ -1.36
UPF3BQ9BZI7 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.57□□□□□ -1.36
UPF3BQ9BZI7 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
UPF3BQ9BZI7 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.56□□□□□ -1.36
UPF3BQ9BZI7 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
UPF3BQ9BZI7 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
UPF3BQ9BZI7 OR13C1P-202ENST00000641378 2919 ntBASIC6.56□□□□□ -1.36
UPF3BQ9BZI7 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
UPF3BQ9BZI7 AC100757.1-201ENST00000616872 1835 ntBASIC6.56□□□□□ -1.36
UPF3BQ9BZI7 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.56□□□□□ -1.36
UPF3BQ9BZI7 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms