Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 ABCC13-202ENST00000463099 3842 ntBASIC5.01□□□□□ -1.61
RSPO3Q9BXY4 AC097063.1-201ENST00000426714 1797 ntBASIC5.01□□□□□ -1.61
RSPO3Q9BXY4 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
RSPO3Q9BXY4 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RSPO3Q9BXY4 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5□□□□□ -1.61
RSPO3Q9BXY4 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5□□□□□ -1.61
RSPO3Q9BXY4 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5□□□□□ -1.61
RSPO3Q9BXY4 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RSPO3Q9BXY4 LINC01963-201ENST00000562038 3148 ntBASIC5□□□□□ -1.61
RSPO3Q9BXY4 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
RSPO3Q9BXY4 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
RSPO3Q9BXY4 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
RSPO3Q9BXY4 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
RSPO3Q9BXY4 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5□□□□□ -1.61
RSPO3Q9BXY4 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5□□□□□ -1.61
RSPO3Q9BXY4 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5□□□□□ -1.61
RSPO3Q9BXY4 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5□□□□□ -1.61
RSPO3Q9BXY4 RPS3AP2-201ENST00000407190 754 ntBASIC5□□□□□ -1.61
RSPO3Q9BXY4 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5□□□□□ -1.61
RSPO3Q9BXY4 BMS1P17-202ENST00000416720 316 ntBASIC5□□□□□ -1.61
RSPO3Q9BXY4 EEF1B2P6-201ENST00000445713 673 ntBASIC5□□□□□ -1.61
RSPO3Q9BXY4 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5□□□□□ -1.61
RSPO3Q9BXY4 LRRC37A14P-201ENST00000452297 462 ntBASIC5□□□□□ -1.61
RSPO3Q9BXY4 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5□□□□□ -1.61
RSPO3Q9BXY4 AC108161.1-201ENST00000461060 402 ntBASIC5□□□□□ -1.61
RSPO3Q9BXY4 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5□□□□□ -1.61
RSPO3Q9BXY4 AC138866.2-201ENST00000508650 584 ntBASIC5□□□□□ -1.61
RSPO3Q9BXY4 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5□□□□□ -1.61
RSPO3Q9BXY4 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5□□□□□ -1.61
RSPO3Q9BXY4 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5□□□□□ -1.61
RSPO3Q9BXY4 AP004607.2-201ENST00000533949 322 ntBASIC5□□□□□ -1.61
RSPO3Q9BXY4 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5□□□□□ -1.61
RSPO3Q9BXY4 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5□□□□□ -1.61
RSPO3Q9BXY4 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5□□□□□ -1.61
RSPO3Q9BXY4 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5□□□□□ -1.61
RSPO3Q9BXY4 AC135626.1-201ENST00000556983 435 ntBASIC5□□□□□ -1.61
RSPO3Q9BXY4 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5□□□□□ -1.61
RSPO3Q9BXY4 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5□□□□□ -1.61
RSPO3Q9BXY4 MTCYBP13-201ENST00000578634 1093 ntBASIC5□□□□□ -1.61
RSPO3Q9BXY4 AC008521.2-201ENST00000591021 259 ntBASIC5□□□□□ -1.61
RSPO3Q9BXY4 AC012616.1-201ENST00000600294 197 ntBASIC5□□□□□ -1.61
RSPO3Q9BXY4 PPATP2-201ENST00000605635 508 ntBASIC5□□□□□ -1.61
RSPO3Q9BXY4 CU639417.4-201ENST00000623928 207 ntBASIC5□□□□□ -1.61
RSPO3Q9BXY4 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RSPO3Q9BXY4 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RSPO3Q9BXY4 AC002525.1-201ENST00000624392 1622 ntBASIC5□□□□□ -1.61
RSPO3Q9BXY4 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
RSPO3Q9BXY4 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
RSPO3Q9BXY4 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5□□□□□ -1.61
RSPO3Q9BXY4 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
RSPO3Q9BXY4 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5□□□□□ -1.61
RSPO3Q9BXY4 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5□□□□□ -1.61
RSPO3Q9BXY4 RNF19BPY-201ENST00000458209 1550 ntBASIC4.99□□□□□ -1.61
RSPO3Q9BXY4 AL034549.2-201ENST00000618285 3373 ntBASIC4.99□□□□□ -1.61
RSPO3Q9BXY4 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
RSPO3Q9BXY4 AP005432.1-201ENST00000580891 3485 ntBASIC4.99□□□□□ -1.61
RSPO3Q9BXY4 AC073136.1-201ENST00000449426 2884 ntBASIC4.99□□□□□ -1.61
RSPO3Q9BXY4 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RSPO3Q9BXY4 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
RSPO3Q9BXY4 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RSPO3Q9BXY4 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RSPO3Q9BXY4 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RSPO3Q9BXY4 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
RSPO3Q9BXY4 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RSPO3Q9BXY4 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RSPO3Q9BXY4 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC4.99□□□□□ -1.61
RSPO3Q9BXY4 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
RSPO3Q9BXY4 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RSPO3Q9BXY4 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
RSPO3Q9BXY4 RN7SKP6-201ENST00000364795 319 ntBASIC4.99□□□□□ -1.61
RSPO3Q9BXY4 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC4.99□□□□□ -1.61
RSPO3Q9BXY4 OR6E1P-201ENST00000414424 923 ntBASIC4.99□□□□□ -1.61
RSPO3Q9BXY4 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC4.99□□□□□ -1.61
RSPO3Q9BXY4 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC4.99□□□□□ -1.61
RSPO3Q9BXY4 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.99□□□□□ -1.61
RSPO3Q9BXY4 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.99□□□□□ -1.61
RSPO3Q9BXY4 RPL31P15-201ENST00000449770 338 ntBASIC4.99□□□□□ -1.61
RSPO3Q9BXY4 AL445665.1-202ENST00000452436 324 ntBASIC4.99□□□□□ -1.61
RSPO3Q9BXY4 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.99□□□□□ -1.61
RSPO3Q9BXY4 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC4.99□□□□□ -1.61
RSPO3Q9BXY4 RN7SL174P-201ENST00000475578 289 ntBASIC4.99□□□□□ -1.61
RSPO3Q9BXY4 PSMA2P2-201ENST00000504319 686 ntBASIC4.99□□□□□ -1.61
RSPO3Q9BXY4 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.99□□□□□ -1.61
RSPO3Q9BXY4 AC109464.1-201ENST00000511091 819 ntBASIC4.99□□□□□ -1.61
RSPO3Q9BXY4 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC4.99□□□□□ -1.61
RSPO3Q9BXY4 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.99□□□□□ -1.61
RSPO3Q9BXY4 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC4.99□□□□□ -1.61
RSPO3Q9BXY4 AC090022.1-201ENST00000546569 311 ntBASIC4.99□□□□□ -1.61
RSPO3Q9BXY4 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.99□□□□□ -1.61
RSPO3Q9BXY4 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.99□□□□□ -1.61
RSPO3Q9BXY4 AC019322.1-201ENST00000571869 389 ntBASIC4.99□□□□□ -1.61
RSPO3Q9BXY4 AC100767.2-201ENST00000604840 693 ntBASIC4.99□□□□□ -1.61
RSPO3Q9BXY4 AL589935.2-201ENST00000616471 1231 ntBASIC4.99□□□□□ -1.61
RSPO3Q9BXY4 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.99□□□□□ -1.61
RSPO3Q9BXY4 AC103703.1-201ENST00000634783 663 ntBASIC4.99□□□□□ -1.61
RSPO3Q9BXY4 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.99□□□□□ -1.61
RSPO3Q9BXY4 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RSPO3Q9BXY4 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RSPO3Q9BXY4 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RSPO3Q9BXY4 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms