Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 VN1R12P-201ENST00000403778 876 ntBASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 AC092570.3-201ENST00000420113 693 ntBASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 AC073410.1-201ENST00000435125 589 ntBASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 GEMIN2P1-201ENST00000454246 752 ntBASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 TVP23BP2-201ENST00000455082 615 ntBASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 LSM3P4-201ENST00000502948 309 ntBASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 RPEP1-201ENST00000504507 658 ntBASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 snoU109.5-201ENST00000516231 132 ntBASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 AC024405.1-201ENST00000532521 1042 ntBASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 AC090424.1-201ENST00000535243 736 ntBASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 MIR4776-2-201ENST00000580204 80 ntBASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 AF129408.1-201ENST00000608767 431 ntBASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 AL355974.3-201ENST00000617383 467 ntBASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 AC095038.2-201ENST00000621464 1070 ntBASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 AC004656.1-201ENST00000568479 4951 ntBASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
CDK5RAP3Q96JB5 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 IFIT1P1-201ENST00000400497 1449 ntBASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 MRRF-207ENST00000373729 870 ntTSL 3 BASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 AC004386.1-201ENST00000393214 761 ntBASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 ATP5F1P6-201ENST00000402768 767 ntBASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 AL445213.1-201ENST00000412589 747 ntBASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 MTND4P11-201ENST00000417020 1058 ntBASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 PTP4A1P3-201ENST00000433661 420 ntBASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 AC099521.1-201ENST00000482557 334 ntBASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 GAPDHP71-201ENST00000511530 1003 ntBASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 AC093770.1-201ENST00000511559 571 ntBASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 RNU6-334P-201ENST00000517072 102 ntBASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 IGKV2-4-201ENST00000523070 340 ntBASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 AC027369.2-201ENST00000528030 440 ntBASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 MIR4271-201ENST00000582451 67 ntBASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 AP001267.4-201ENST00000602598 545 ntBASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 AC145423.1-201ENST00000605712 336 ntBASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 MIR6809-201ENST00000612189 116 ntBASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 MIR6793-201ENST00000612376 63 ntBASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 AC015922.4-201ENST00000612568 690 ntBASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 AC018926.1-201ENST00000616335 435 ntBASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC6.61□□□□□ -1.35
CDK5RAP3Q96JB5 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms