Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
HPS3Q969F9 AF287957.1-201ENST00000607368 1595 ntBASIC6.56□□□□□ -1.36
HPS3Q969F9 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
HPS3Q969F9 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
HPS3Q969F9 MFSD8-219ENST00000641228 2559 ntBASIC6.56□□□□□ -1.36
HPS3Q969F9 ZNF90P1-201ENST00000480493 1951 ntBASIC6.55□□□□□ -1.36
HPS3Q969F9 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC6.55□□□□□ -1.36
HPS3Q969F9 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
HPS3Q969F9 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HPS3Q969F9 COX6B1P3-201ENST00000312310 260 ntBASIC6.55□□□□□ -1.36
HPS3Q969F9 RN7SKP269-201ENST00000365545 319 ntBASIC6.55□□□□□ -1.36
HPS3Q969F9 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.55□□□□□ -1.36
HPS3Q969F9 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
HPS3Q969F9 RNU4-27P-201ENST00000410889 139 ntBASIC6.55□□□□□ -1.36
HPS3Q969F9 RPL26P37-201ENST00000411983 438 ntBASIC6.55□□□□□ -1.36
HPS3Q969F9 RPS4XP5-201ENST00000419038 768 ntBASIC6.55□□□□□ -1.36
HPS3Q969F9 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.55□□□□□ -1.36
HPS3Q969F9 MTCYBP32-201ENST00000427945 1084 ntBASIC6.55□□□□□ -1.36
HPS3Q969F9 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC6.55□□□□□ -1.36
HPS3Q969F9 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC6.55□□□□□ -1.36
HPS3Q969F9 BMS1P10-201ENST00000443754 1120 ntBASIC6.55□□□□□ -1.36
HPS3Q969F9 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC6.55□□□□□ -1.36
HPS3Q969F9 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.55□□□□□ -1.36
HPS3Q969F9 PFN1P6-201ENST00000476786 399 ntBASIC6.55□□□□□ -1.36
HPS3Q969F9 SETP6-201ENST00000479329 568 ntBASIC6.55□□□□□ -1.36
HPS3Q969F9 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.55□□□□□ -1.36
HPS3Q969F9 AC121161.1-201ENST00000510606 652 ntBASIC6.55□□□□□ -1.36
HPS3Q969F9 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.55□□□□□ -1.36
HPS3Q969F9 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.55□□□□□ -1.36
HPS3Q969F9 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.55□□□□□ -1.36
HPS3Q969F9 AC079905.1-201ENST00000549280 475 ntBASIC6.55□□□□□ -1.36
HPS3Q969F9 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.55□□□□□ -1.36
HPS3Q969F9 YWHAZP1-201ENST00000556286 722 ntBASIC6.55□□□□□ -1.36
HPS3Q969F9 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.55□□□□□ -1.36
HPS3Q969F9 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.55□□□□□ -1.36
HPS3Q969F9 AC026826.3-201ENST00000561747 158 ntBASIC6.55□□□□□ -1.36
HPS3Q969F9 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.55□□□□□ -1.36
HPS3Q969F9 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.55□□□□□ -1.36
HPS3Q969F9 AC021483.2-201ENST00000567415 758 ntBASIC6.55□□□□□ -1.36
HPS3Q969F9 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HPS3Q969F9 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HPS3Q969F9 AC079315.1-201ENST00000602952 623 ntBASIC6.55□□□□□ -1.36
HPS3Q969F9 AC026741.1-201ENST00000605892 482 ntBASIC6.55□□□□□ -1.36
HPS3Q969F9 AP001437.1-201ENST00000608783 456 ntBASIC6.55□□□□□ -1.36
HPS3Q969F9 AC108673.3-201ENST00000609183 335 ntBASIC6.55□□□□□ -1.36
HPS3Q969F9 AC004808.1-201ENST00000627671 721 ntBASIC6.55□□□□□ -1.36
HPS3Q969F9 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC6.55□□□□□ -1.36
HPS3Q969F9 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HPS3Q969F9 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HPS3Q969F9 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HPS3Q969F9 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.55□□□□□ -1.36
HPS3Q969F9 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC6.55□□□□□ -1.36
HPS3Q969F9 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
HPS3Q969F9 DDX18P6-201ENST00000450119 1997 ntBASIC6.55□□□□□ -1.36
HPS3Q969F9 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.55□□□□□ -1.36
HPS3Q969F9 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
HPS3Q969F9 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
HPS3Q969F9 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.55□□□□□ -1.36
HPS3Q969F9 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HPS3Q969F9 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
HPS3Q969F9 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HPS3Q969F9 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
HPS3Q969F9 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HPS3Q969F9 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HPS3Q969F9 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
HPS3Q969F9 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HPS3Q969F9 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.54□□□□□ -1.36
HPS3Q969F9 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HPS3Q969F9 IFIT1P1-201ENST00000400497 1449 ntBASIC6.54□□□□□ -1.36
HPS3Q969F9 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
HPS3Q969F9 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
HPS3Q969F9 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.54□□□□□ -1.36
HPS3Q969F9 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
HPS3Q969F9 AL391422.1-201ENST00000402155 436 ntBASIC6.54□□□□□ -1.36
HPS3Q969F9 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC6.54□□□□□ -1.36
HPS3Q969F9 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC6.54□□□□□ -1.36
HPS3Q969F9 AC110602.1-201ENST00000437414 318 ntBASIC6.54□□□□□ -1.36
HPS3Q969F9 Z84478.1-201ENST00000438230 1219 ntBASIC6.54□□□□□ -1.36
HPS3Q969F9 SNRPFP2-201ENST00000440710 251 ntBASIC6.54□□□□□ -1.36
HPS3Q969F9 RPL7P55-201ENST00000450522 746 ntBASIC6.54□□□□□ -1.36
HPS3Q969F9 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.54□□□□□ -1.36
HPS3Q969F9 AC023194.2-201ENST00000465398 406 ntBASIC6.54□□□□□ -1.36
HPS3Q969F9 AC023245.1-201ENST00000468501 517 ntBASIC6.54□□□□□ -1.36
HPS3Q969F9 SYT14P1-201ENST00000481459 721 ntBASIC6.54□□□□□ -1.36
HPS3Q969F9 AC116562.1-201ENST00000485355 781 ntBASIC6.54□□□□□ -1.36
HPS3Q969F9 AC012123.2-201ENST00000485809 248 ntBASIC6.54□□□□□ -1.36
HPS3Q969F9 PSMA2P2-201ENST00000504319 686 ntBASIC6.54□□□□□ -1.36
HPS3Q969F9 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.54□□□□□ -1.36
HPS3Q969F9 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.54□□□□□ -1.36
HPS3Q969F9 AC110760.3-202ENST00000515177 371 ntBASIC6.54□□□□□ -1.36
HPS3Q969F9 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC6.54□□□□□ -1.36
HPS3Q969F9 AC090424.1-201ENST00000535243 736 ntBASIC6.54□□□□□ -1.36
HPS3Q969F9 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
HPS3Q969F9 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC6.54□□□□□ -1.36
HPS3Q969F9 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.54□□□□□ -1.36
HPS3Q969F9 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.54□□□□□ -1.36
HPS3Q969F9 GLRXP2-201ENST00000555594 321 ntBASIC6.54□□□□□ -1.36
HPS3Q969F9 AC023158.1-201ENST00000561632 1025 ntBASIC6.54□□□□□ -1.36
HPS3Q969F9 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC6.54□□□□□ -1.36
HPS3Q969F9 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms