Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PTP4A1Q93096 AL121839.2-201ENST00000565058 6943 ntBASIC5.27□□□□□ -1.57
PTP4A1Q93096 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
PTP4A1Q93096 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
PTP4A1Q93096 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
PTP4A1Q93096 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
PTP4A1Q93096 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
PTP4A1Q93096 METTL5-202ENST00000308099 629 ntTSL 3 BASIC5.27□□□□□ -1.57
PTP4A1Q93096 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PTP4A1Q93096 RNU1-134P-201ENST00000362935 165 ntBASIC5.27□□□□□ -1.57
PTP4A1Q93096 RN7SKP78-201ENST00000364711 318 ntBASIC5.27□□□□□ -1.57
PTP4A1Q93096 MIR421-201ENST00000365696 85 ntBASIC5.27□□□□□ -1.57
PTP4A1Q93096 AC087752.1-201ENST00000391360 558 ntBASIC5.27□□□□□ -1.57
PTP4A1Q93096 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.27□□□□□ -1.57
PTP4A1Q93096 AL132875.1-201ENST00000403623 949 ntBASIC5.27□□□□□ -1.57
PTP4A1Q93096 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.27□□□□□ -1.57
PTP4A1Q93096 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.27□□□□□ -1.57
PTP4A1Q93096 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.27□□□□□ -1.57
PTP4A1Q93096 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.27□□□□□ -1.57
PTP4A1Q93096 SOCS5P3-201ENST00000425115 1576 ntBASIC5.27□□□□□ -1.57
PTP4A1Q93096 AC130360.1-201ENST00000425489 1117 ntBASIC5.27□□□□□ -1.57
PTP4A1Q93096 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.27□□□□□ -1.57
PTP4A1Q93096 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.27□□□□□ -1.57
PTP4A1Q93096 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
PTP4A1Q93096 GAPDHP59-201ENST00000435908 267 ntBASIC5.27□□□□□ -1.57
PTP4A1Q93096 RN7SL188P-201ENST00000469842 285 ntBASIC5.27□□□□□ -1.57
PTP4A1Q93096 AC006539.1-201ENST00000481419 501 ntBASIC5.27□□□□□ -1.57
PTP4A1Q93096 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.27□□□□□ -1.57
PTP4A1Q93096 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PTP4A1Q93096 AC122718.2-201ENST00000505325 591 ntBASIC5.27□□□□□ -1.57
PTP4A1Q93096 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.27□□□□□ -1.57
PTP4A1Q93096 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.27□□□□□ -1.57
PTP4A1Q93096 AC130365.2-201ENST00000525882 1201 ntBASIC5.27□□□□□ -1.57
PTP4A1Q93096 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.27□□□□□ -1.57
PTP4A1Q93096 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.27□□□□□ -1.57
PTP4A1Q93096 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.27□□□□□ -1.57
PTP4A1Q93096 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.27□□□□□ -1.57
PTP4A1Q93096 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PTP4A1Q93096 AGGF1P7-201ENST00000562369 913 ntBASIC5.27□□□□□ -1.57
PTP4A1Q93096 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
PTP4A1Q93096 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.27□□□□□ -1.57
PTP4A1Q93096 ZNF322P1-201ENST00000568013 1209 ntBASIC5.27□□□□□ -1.57
PTP4A1Q93096 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.27□□□□□ -1.57
PTP4A1Q93096 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PTP4A1Q93096 MIR4701-201ENST00000583094 63 ntBASIC5.27□□□□□ -1.57
PTP4A1Q93096 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.27□□□□□ -1.57
PTP4A1Q93096 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.27□□□□□ -1.57
PTP4A1Q93096 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.27□□□□□ -1.57
PTP4A1Q93096 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.27□□□□□ -1.57
PTP4A1Q93096 AC135803.1-201ENST00000608748 565 ntBASIC5.27□□□□□ -1.57
PTP4A1Q93096 AL359091.2-201ENST00000609303 556 ntBASIC5.27□□□□□ -1.57
PTP4A1Q93096 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.27□□□□□ -1.57
PTP4A1Q93096 AC015712.7-201ENST00000615211 635 ntBASIC5.27□□□□□ -1.57
PTP4A1Q93096 AC024884.1-201ENST00000620583 399 ntBASIC5.27□□□□□ -1.57
PTP4A1Q93096 AC020763.5-201ENST00000623298 430 ntBASIC5.27□□□□□ -1.57
PTP4A1Q93096 AC007382.1-201ENST00000624376 2618 ntBASIC5.27□□□□□ -1.57
PTP4A1Q93096 AP001052.1-201ENST00000626421 99 ntBASIC5.27□□□□□ -1.57
PTP4A1Q93096 AC073488.6-201ENST00000632293 754 ntBASIC5.27□□□□□ -1.57
PTP4A1Q93096 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.27□□□□□ -1.57
PTP4A1Q93096 AL357140.4-201ENST00000636827 412 ntBASIC5.27□□□□□ -1.57
PTP4A1Q93096 AC119674.1-212ENST00000641155 993 ntBASIC5.27□□□□□ -1.57
PTP4A1Q93096 OR51C1P-202ENST00000641159 1444 ntBASIC5.27□□□□□ -1.57
PTP4A1Q93096 OR5AC4P-202ENST00000642086 985 ntBASIC5.27□□□□□ -1.57
PTP4A1Q93096 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.27□□□□□ -1.57
PTP4A1Q93096 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PTP4A1Q93096 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PTP4A1Q93096 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PTP4A1Q93096 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
PTP4A1Q93096 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
PTP4A1Q93096 HSPD1P9-201ENST00000420325 1636 ntBASIC5.26□□□□□ -1.57
PTP4A1Q93096 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.26□□□□□ -1.57
PTP4A1Q93096 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.26□□□□□ -1.57
PTP4A1Q93096 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
PTP4A1Q93096 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.26□□□□□ -1.57
PTP4A1Q93096 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PTP4A1Q93096 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PTP4A1Q93096 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.26□□□□□ -1.57
PTP4A1Q93096 AC083799.1-201ENST00000366451 910 ntBASIC5.26□□□□□ -1.57
PTP4A1Q93096 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PTP4A1Q93096 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.26□□□□□ -1.57
PTP4A1Q93096 SNRPEP6-201ENST00000407465 277 ntBASIC5.26□□□□□ -1.57
PTP4A1Q93096 RNU2-50P-201ENST00000410494 143 ntBASIC5.26□□□□□ -1.57
PTP4A1Q93096 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.26□□□□□ -1.57
PTP4A1Q93096 EEF1B2P8-201ENST00000414101 671 ntBASIC5.26□□□□□ -1.57
PTP4A1Q93096 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.26□□□□□ -1.57
PTP4A1Q93096 AC118758.1-202ENST00000454719 225 ntBASIC5.26□□□□□ -1.57
PTP4A1Q93096 AC021006.1-201ENST00000489849 553 ntBASIC5.26□□□□□ -1.57
PTP4A1Q93096 AL117692.1-201ENST00000494283 713 ntBASIC5.26□□□□□ -1.57
PTP4A1Q93096 AC015864.1-201ENST00000496512 544 ntBASIC5.26□□□□□ -1.57
PTP4A1Q93096 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.26□□□□□ -1.57
PTP4A1Q93096 AC008629.2-201ENST00000503783 483 ntBASIC5.26□□□□□ -1.57
PTP4A1Q93096 AL671862.1-201ENST00000515851 349 ntBASIC5.26□□□□□ -1.57
PTP4A1Q93096 RN7SKP183-201ENST00000517169 324 ntBASIC5.26□□□□□ -1.57
PTP4A1Q93096 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.26□□□□□ -1.57
PTP4A1Q93096 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC5.26□□□□□ -1.57
PTP4A1Q93096 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.26□□□□□ -1.57
PTP4A1Q93096 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.26□□□□□ -1.57
PTP4A1Q93096 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.26□□□□□ -1.57
PTP4A1Q93096 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PTP4A1Q93096 MRPS21P8-201ENST00000569196 235 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 145.8 ms