Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC6.07□□□□□ -1.44
CCDC112Q8NEF3 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.07□□□□□ -1.44
CCDC112Q8NEF3 CDC42P3-201ENST00000518493 633 ntBASIC6.07□□□□□ -1.44
CCDC112Q8NEF3 AC027369.2-201ENST00000528030 440 ntBASIC6.07□□□□□ -1.44
CCDC112Q8NEF3 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC6.07□□□□□ -1.44
CCDC112Q8NEF3 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC112Q8NEF3 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.07□□□□□ -1.44
CCDC112Q8NEF3 AC023389.2-201ENST00000580031 955 ntBASIC6.07□□□□□ -1.44
CCDC112Q8NEF3 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.07□□□□□ -1.44
CCDC112Q8NEF3 AC108738.1-201ENST00000603703 237 ntBASIC6.07□□□□□ -1.44
CCDC112Q8NEF3 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.07□□□□□ -1.44
CCDC112Q8NEF3 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.07□□□□□ -1.44
CCDC112Q8NEF3 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.07□□□□□ -1.44
CCDC112Q8NEF3 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC112Q8NEF3 AC008079.2-201ENST00000623543 20396 ntBASIC6.07□□□□□ -1.44
CCDC112Q8NEF3 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
CCDC112Q8NEF3 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC6.07□□□□□ -1.44
CCDC112Q8NEF3 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
CCDC112Q8NEF3 AC104260.2-201ENST00000623551 3497 ntBASIC6.06□□□□□ -1.44
CCDC112Q8NEF3 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.06□□□□□ -1.44
CCDC112Q8NEF3 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC112Q8NEF3 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
CCDC112Q8NEF3 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
CCDC112Q8NEF3 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.06□□□□□ -1.44
CCDC112Q8NEF3 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC112Q8NEF3 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.06□□□□□ -1.44
CCDC112Q8NEF3 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC112Q8NEF3 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC112Q8NEF3 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
CCDC112Q8NEF3 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC112Q8NEF3 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC112Q8NEF3 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
CCDC112Q8NEF3 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC6.06□□□□□ -1.44
CCDC112Q8NEF3 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC6.06□□□□□ -1.44
CCDC112Q8NEF3 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC112Q8NEF3 RPS29P14-201ENST00000431518 171 ntBASIC6.06□□□□□ -1.44
CCDC112Q8NEF3 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC112Q8NEF3 AL353662.1-201ENST00000439099 327 ntBASIC6.06□□□□□ -1.44
CCDC112Q8NEF3 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.06□□□□□ -1.44
CCDC112Q8NEF3 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC112Q8NEF3 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.06□□□□□ -1.44
CCDC112Q8NEF3 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.06□□□□□ -1.44
CCDC112Q8NEF3 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.06□□□□□ -1.44
CCDC112Q8NEF3 AC005244.1-201ENST00000582566 339 ntBASIC6.06□□□□□ -1.44
CCDC112Q8NEF3 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.06□□□□□ -1.44
CCDC112Q8NEF3 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC112Q8NEF3 UOX-205ENST00000640983 544 ntTSL 4 BASIC6.06□□□□□ -1.44
CCDC112Q8NEF3 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC112Q8NEF3 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC112Q8NEF3 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
CCDC112Q8NEF3 PWAR1-201ENST00000624188 2414 ntBASIC6.06□□□□□ -1.44
CCDC112Q8NEF3 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC112Q8NEF3 CASC19-238ENST00000641523 1558 ntBASIC6.06□□□□□ -1.44
CCDC112Q8NEF3 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC6.05□□□□□ -1.44
CCDC112Q8NEF3 MUC2-202ENST00000613187 4845 ntBASIC6.05□□□□□ -1.44
CCDC112Q8NEF3 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC112Q8NEF3 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC112Q8NEF3 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC112Q8NEF3 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC6.05□□□□□ -1.44
CCDC112Q8NEF3 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC6.05□□□□□ -1.44
CCDC112Q8NEF3 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC112Q8NEF3 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC112Q8NEF3 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
CCDC112Q8NEF3 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC112Q8NEF3 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
CCDC112Q8NEF3 GAPDHP24-201ENST00000328713 983 ntBASIC6.05□□□□□ -1.44
CCDC112Q8NEF3 AL096711.1-201ENST00000404780 554 ntBASIC6.05□□□□□ -1.44
CCDC112Q8NEF3 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC112Q8NEF3 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.05□□□□□ -1.44
CCDC112Q8NEF3 AC017019.1-201ENST00000426129 261 ntBASIC6.05□□□□□ -1.44
CCDC112Q8NEF3 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.05□□□□□ -1.44
CCDC112Q8NEF3 TPT1P1-201ENST00000458495 518 ntBASIC6.05□□□□□ -1.44
CCDC112Q8NEF3 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.05□□□□□ -1.44
CCDC112Q8NEF3 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC112Q8NEF3 IMPA1P1-201ENST00000510718 842 ntBASIC6.05□□□□□ -1.44
CCDC112Q8NEF3 EIF3KP3-201ENST00000514461 639 ntBASIC6.05□□□□□ -1.44
CCDC112Q8NEF3 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.05□□□□□ -1.44
CCDC112Q8NEF3 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.05□□□□□ -1.44
CCDC112Q8NEF3 AC130364.2-201ENST00000528639 604 ntBASIC6.05□□□□□ -1.44
CCDC112Q8NEF3 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC6.05□□□□□ -1.44
CCDC112Q8NEF3 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.05□□□□□ -1.44
CCDC112Q8NEF3 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC112Q8NEF3 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.05□□□□□ -1.44
CCDC112Q8NEF3 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC6.05□□□□□ -1.44
CCDC112Q8NEF3 RN7SL753P-201ENST00000581238 290 ntBASIC6.05□□□□□ -1.44
CCDC112Q8NEF3 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC6.05□□□□□ -1.44
CCDC112Q8NEF3 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC6.05□□□□□ -1.44
CCDC112Q8NEF3 AL136228.1-201ENST00000622221 319 ntBASIC6.05□□□□□ -1.44
CCDC112Q8NEF3 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
CCDC112Q8NEF3 AC004817.4-201ENST00000602396 3625 ntBASIC6.05□□□□□ -1.44
CCDC112Q8NEF3 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC112Q8NEF3 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC112Q8NEF3 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC6.05□□□□□ -1.44
CCDC112Q8NEF3 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC112Q8NEF3 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.05□□□□□ -1.44
CCDC112Q8NEF3 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
CCDC112Q8NEF3 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CCDC112Q8NEF3 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
CCDC112Q8NEF3 AC000374.1-201ENST00000434698 1745 ntBASIC6.05□□□□□ -1.44
CCDC112Q8NEF3 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 170.1 ms