Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.18□□□□□ -1.58
SCN1BQ07699 RNU1-74P-201ENST00000384108 171 ntBASIC5.18□□□□□ -1.58
SCN1BQ07699 RNU6-244P-201ENST00000391028 104 ntBASIC5.18□□□□□ -1.58
SCN1BQ07699 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SCN1BQ07699 PSMA6P1-201ENST00000400275 741 ntBASIC5.18□□□□□ -1.58
SCN1BQ07699 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC5.18□□□□□ -1.58
SCN1BQ07699 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SCN1BQ07699 OR5M12P-201ENST00000423388 929 ntBASIC5.18□□□□□ -1.58
SCN1BQ07699 AC009784.1-201ENST00000426484 460 ntBASIC5.18□□□□□ -1.58
SCN1BQ07699 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SCN1BQ07699 RPS26P4-201ENST00000431743 355 ntBASIC5.18□□□□□ -1.58
SCN1BQ07699 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.18□□□□□ -1.58
SCN1BQ07699 PSMD10P2-201ENST00000432890 672 ntBASIC5.18□□□□□ -1.58
SCN1BQ07699 AL359265.1-201ENST00000440296 795 ntBASIC5.18□□□□□ -1.58
SCN1BQ07699 MTCYBP12-201ENST00000440559 1134 ntBASIC5.18□□□□□ -1.58
SCN1BQ07699 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.18□□□□□ -1.58
SCN1BQ07699 TCEA1P3-201ENST00000443005 880 ntBASIC5.18□□□□□ -1.58
SCN1BQ07699 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.18□□□□□ -1.58
SCN1BQ07699 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.18□□□□□ -1.58
SCN1BQ07699 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC5.18□□□□□ -1.58
SCN1BQ07699 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.18□□□□□ -1.58
SCN1BQ07699 RPS4XP12-201ENST00000461747 709 ntBASIC5.18□□□□□ -1.58
SCN1BQ07699 RN7SL836P-201ENST00000476140 296 ntBASIC5.18□□□□□ -1.58
SCN1BQ07699 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.18□□□□□ -1.58
SCN1BQ07699 SSR3-208ENST00000496050 579 ntTSL 4 BASIC5.18□□□□□ -1.58
SCN1BQ07699 AC023424.1-201ENST00000496058 459 ntBASIC5.18□□□□□ -1.58
SCN1BQ07699 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SCN1BQ07699 SNX18P24-201ENST00000505249 671 ntBASIC5.18□□□□□ -1.58
SCN1BQ07699 MTCO1P31-201ENST00000506355 492 ntBASIC5.18□□□□□ -1.58
SCN1BQ07699 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.18□□□□□ -1.58
SCN1BQ07699 TMEM97P2-201ENST00000517841 403 ntBASIC5.18□□□□□ -1.58
SCN1BQ07699 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.18□□□□□ -1.58
SCN1BQ07699 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.18□□□□□ -1.58
SCN1BQ07699 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.18□□□□□ -1.58
SCN1BQ07699 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.18□□□□□ -1.58
SCN1BQ07699 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC5.18□□□□□ -1.58
SCN1BQ07699 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.18□□□□□ -1.58
SCN1BQ07699 NPIPB14P-203ENST00000532298 987 ntBASIC5.18□□□□□ -1.58
SCN1BQ07699 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.18□□□□□ -1.58
SCN1BQ07699 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC5.18□□□□□ -1.58
SCN1BQ07699 AP001858.2-201ENST00000536213 601 ntBASIC5.18□□□□□ -1.58
SCN1BQ07699 AC125612.1-201ENST00000547580 377 ntBASIC5.18□□□□□ -1.58
SCN1BQ07699 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.18□□□□□ -1.58
SCN1BQ07699 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.18□□□□□ -1.58
SCN1BQ07699 AC023158.1-201ENST00000561632 1025 ntBASIC5.18□□□□□ -1.58
SCN1BQ07699 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.18□□□□□ -1.58
SCN1BQ07699 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.18□□□□□ -1.58
SCN1BQ07699 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.18□□□□□ -1.58
SCN1BQ07699 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.18□□□□□ -1.58
SCN1BQ07699 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.18□□□□□ -1.58
SCN1BQ07699 AP005131.7-201ENST00000610087 611 ntBASIC5.18□□□□□ -1.58
SCN1BQ07699 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SCN1BQ07699 CR589904.2-201ENST00000612533 440 ntBASIC5.18□□□□□ -1.58
SCN1BQ07699 RN7SL261P-201ENST00000613441 282 ntBASIC5.18□□□□□ -1.58
SCN1BQ07699 AL354696.1-201ENST00000614652 497 ntBASIC5.18□□□□□ -1.58
SCN1BQ07699 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.18□□□□□ -1.58
SCN1BQ07699 AC119674.1-212ENST00000641155 993 ntBASIC5.18□□□□□ -1.58
SCN1BQ07699 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SCN1BQ07699 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.18□□□□□ -1.58
SCN1BQ07699 FBXL21-201ENST00000297158 1305 ntBASIC5.18□□□□□ -1.58
SCN1BQ07699 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.18□□□□□ -1.58
SCN1BQ07699 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SCN1BQ07699 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SCN1BQ07699 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SCN1BQ07699 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SCN1BQ07699 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SCN1BQ07699 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SCN1BQ07699 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.17□□□□□ -1.58
SCN1BQ07699 AC011933.2-201ENST00000578539 2790 ntBASIC5.17□□□□□ -1.58
SCN1BQ07699 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
SCN1BQ07699 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SCN1BQ07699 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
SCN1BQ07699 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SCN1BQ07699 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.17□□□□□ -1.58
SCN1BQ07699 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SCN1BQ07699 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SCN1BQ07699 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.17□□□□□ -1.58
SCN1BQ07699 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SCN1BQ07699 AL133482.1-201ENST00000415988 498 ntBASIC5.17□□□□□ -1.58
SCN1BQ07699 RPS7P8-201ENST00000418311 581 ntBASIC5.17□□□□□ -1.58
SCN1BQ07699 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.17□□□□□ -1.58
SCN1BQ07699 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.17□□□□□ -1.58
SCN1BQ07699 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.17□□□□□ -1.58
SCN1BQ07699 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SCN1BQ07699 RPL12P18-201ENST00000437175 325 ntBASIC5.17□□□□□ -1.58
SCN1BQ07699 HIGD1AP16-201ENST00000450986 258 ntBASIC5.17□□□□□ -1.58
SCN1BQ07699 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.17□□□□□ -1.58
SCN1BQ07699 RPL10P17-201ENST00000453852 316 ntBASIC5.17□□□□□ -1.58
SCN1BQ07699 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.17□□□□□ -1.58
SCN1BQ07699 AC020779.1-201ENST00000478757 796 ntBASIC5.17□□□□□ -1.58
SCN1BQ07699 AC114324.2-202ENST00000503812 134 ntBASIC5.17□□□□□ -1.58
SCN1BQ07699 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.17□□□□□ -1.58
SCN1BQ07699 KHDC1P1-201ENST00000511053 508 ntBASIC5.17□□□□□ -1.58
SCN1BQ07699 AC108471.1-201ENST00000513977 287 ntBASIC5.17□□□□□ -1.58
SCN1BQ07699 FTH1P11-201ENST00000517577 551 ntBASIC5.17□□□□□ -1.58
SCN1BQ07699 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.17□□□□□ -1.58
SCN1BQ07699 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.17□□□□□ -1.58
SCN1BQ07699 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.17□□□□□ -1.58
SCN1BQ07699 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.17□□□□□ -1.58
SCN1BQ07699 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms