Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.38□□□□□ -1.55
LTBQ06643 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.38□□□□□ -1.55
LTBQ06643 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.38□□□□□ -1.55
LTBQ06643 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.38□□□□□ -1.55
LTBQ06643 AP002371.1-201ENST00000463604 433 ntBASIC5.38□□□□□ -1.55
LTBQ06643 AC115223.1-201ENST00000466377 870 ntBASIC5.38□□□□□ -1.55
LTBQ06643 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC5.38□□□□□ -1.55
LTBQ06643 TRBV5-2-201ENST00000489095 273 ntBASIC5.38□□□□□ -1.55
LTBQ06643 TRAV31-201ENST00000502780 342 ntBASIC5.38□□□□□ -1.55
LTBQ06643 AL158068.1-201ENST00000506116 616 ntBASIC5.38□□□□□ -1.55
LTBQ06643 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.38□□□□□ -1.55
LTBQ06643 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.38□□□□□ -1.55
LTBQ06643 ST13P12-201ENST00000508958 1094 ntBASIC5.38□□□□□ -1.55
LTBQ06643 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.38□□□□□ -1.55
LTBQ06643 PRMT5P1-201ENST00000514351 598 ntBASIC5.38□□□□□ -1.55
LTBQ06643 AC112198.4-201ENST00000515450 351 ntBASIC5.38□□□□□ -1.55
LTBQ06643 RN7SKP238-201ENST00000516483 249 ntBASIC5.38□□□□□ -1.55
LTBQ06643 TMEM97P2-201ENST00000517841 403 ntBASIC5.38□□□□□ -1.55
LTBQ06643 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5.38□□□□□ -1.55
LTBQ06643 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.38□□□□□ -1.55
LTBQ06643 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.38□□□□□ -1.55
LTBQ06643 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC5.38□□□□□ -1.55
LTBQ06643 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC5.38□□□□□ -1.55
LTBQ06643 AC068305.2-201ENST00000550567 1205 ntBASIC5.38□□□□□ -1.55
LTBQ06643 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.38□□□□□ -1.55
LTBQ06643 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.38□□□□□ -1.55
LTBQ06643 AC011270.1-201ENST00000558606 583 ntBASIC5.38□□□□□ -1.55
LTBQ06643 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC5.38□□□□□ -1.55
LTBQ06643 CD24P2-201ENST00000565486 219 ntBASIC5.38□□□□□ -1.55
LTBQ06643 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.38□□□□□ -1.55
LTBQ06643 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.38□□□□□ -1.55
LTBQ06643 AC006116.7-201ENST00000590141 756 ntBASIC5.38□□□□□ -1.55
LTBQ06643 AL049840.6-201ENST00000604583 345 ntBASIC5.38□□□□□ -1.55
LTBQ06643 AC073111.2-201ENST00000605657 1075 ntBASIC5.38□□□□□ -1.55
LTBQ06643 AP000864.1-201ENST00000609424 650 ntBASIC5.38□□□□□ -1.55
LTBQ06643 AL356608.1-201ENST00000610034 820 ntBASIC5.38□□□□□ -1.55
LTBQ06643 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.38□□□□□ -1.55
LTBQ06643 AC004777.1-201ENST00000624317 287 ntBASIC5.38□□□□□ -1.55
LTBQ06643 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LTBQ06643 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LTBQ06643 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.38□□□□□ -1.55
LTBQ06643 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
LTBQ06643 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.38□□□□□ -1.55
LTBQ06643 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LTBQ06643 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LTBQ06643 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
LTBQ06643 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
LTBQ06643 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LTBQ06643 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.37□□□□□ -1.55
LTBQ06643 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LTBQ06643 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LTBQ06643 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
LTBQ06643 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LTBQ06643 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LTBQ06643 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LTBQ06643 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LTBQ06643 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LTBQ06643 RNU6-386P-201ENST00000362650 107 ntBASIC5.37□□□□□ -1.55
LTBQ06643 RNA5SP211-201ENST00000365516 117 ntBASIC5.37□□□□□ -1.55
LTBQ06643 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.37□□□□□ -1.55
LTBQ06643 MIR130B-202ENST00000385018 82 ntBASIC5.37□□□□□ -1.55
LTBQ06643 MIR122-201ENST00000385044 85 ntBASIC5.37□□□□□ -1.55
LTBQ06643 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
LTBQ06643 RNU6-316P-201ENST00000391027 107 ntBASIC5.37□□□□□ -1.55
LTBQ06643 AL139039.2-201ENST00000407436 479 ntBASIC5.37□□□□□ -1.55
LTBQ06643 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.37□□□□□ -1.55
LTBQ06643 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC5.37□□□□□ -1.55
LTBQ06643 AL512504.1-201ENST00000415494 778 ntBASIC5.37□□□□□ -1.55
LTBQ06643 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.37□□□□□ -1.55
LTBQ06643 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.37□□□□□ -1.55
LTBQ06643 MTCO2P1-201ENST00000424648 477 ntBASIC5.37□□□□□ -1.55
LTBQ06643 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.37□□□□□ -1.55
LTBQ06643 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC5.37□□□□□ -1.55
LTBQ06643 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.37□□□□□ -1.55
LTBQ06643 TPTE2P3-201ENST00000441562 1189 ntBASIC5.37□□□□□ -1.55
LTBQ06643 TRIM60P16-201ENST00000444048 694 ntBASIC5.37□□□□□ -1.55
LTBQ06643 MTCYBP11-201ENST00000447254 1109 ntBASIC5.37□□□□□ -1.55
LTBQ06643 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.37□□□□□ -1.55
LTBQ06643 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.37□□□□□ -1.55
LTBQ06643 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.37□□□□□ -1.55
LTBQ06643 AC104164.1-201ENST00000460282 590 ntBASIC5.37□□□□□ -1.55
LTBQ06643 RN7SL269P-201ENST00000467795 305 ntBASIC5.37□□□□□ -1.55
LTBQ06643 RN7SL860P-201ENST00000473738 223 ntBASIC5.37□□□□□ -1.55
LTBQ06643 AC083795.1-201ENST00000491760 320 ntBASIC5.37□□□□□ -1.55
LTBQ06643 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LTBQ06643 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.37□□□□□ -1.55
LTBQ06643 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.37□□□□□ -1.55
LTBQ06643 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.37□□□□□ -1.55
LTBQ06643 RNA5SP340-201ENST00000517132 107 ntBASIC5.37□□□□□ -1.55
LTBQ06643 IGLVIV-66-1-201ENST00000521832 460 ntBASIC5.37□□□□□ -1.55
LTBQ06643 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.37□□□□□ -1.55
LTBQ06643 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
LTBQ06643 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.37□□□□□ -1.55
LTBQ06643 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.37□□□□□ -1.55
LTBQ06643 AC068339.2-201ENST00000534395 618 ntBASIC5.37□□□□□ -1.55
LTBQ06643 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.37□□□□□ -1.55
LTBQ06643 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.37□□□□□ -1.55
LTBQ06643 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.37□□□□□ -1.55
LTBQ06643 AC093524.1-201ENST00000564266 1094 ntBASIC5.37□□□□□ -1.55
LTBQ06643 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms