Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC073592.6-201ENST00000624271 415 ntBASIC4.28□□□□□ -1.72
HIST1H1AQ02539 AC021766.1-201ENST00000624404 741 ntBASIC4.28□□□□□ -1.72
HIST1H1AQ02539 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC4.28□□□□□ -1.72
HIST1H1AQ02539 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HIST1H1AQ02539 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HIST1H1AQ02539 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
HIST1H1AQ02539 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
HIST1H1AQ02539 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
HIST1H1AQ02539 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
HIST1H1AQ02539 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC4.28□□□□□ -1.72
HIST1H1AQ02539 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
HIST1H1AQ02539 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.73
HIST1H1AQ02539 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.73
HIST1H1AQ02539 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC4.27□□□□□ -1.73
HIST1H1AQ02539 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.27□□□□□ -1.73
HIST1H1AQ02539 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
HIST1H1AQ02539 AC083843.3-201ENST00000623679 2186 ntBASIC4.27□□□□□ -1.73
HIST1H1AQ02539 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.27□□□□□ -1.73
HIST1H1AQ02539 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.27□□□□□ -1.73
HIST1H1AQ02539 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HIST1H1AQ02539 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC4.27□□□□□ -1.73
HIST1H1AQ02539 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
HIST1H1AQ02539 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
HIST1H1AQ02539 AL731566.1-201ENST00000620490 1937 ntBASIC4.27□□□□□ -1.73
HIST1H1AQ02539 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC4.27□□□□□ -1.73
HIST1H1AQ02539 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC4.27□□□□□ -1.73
HIST1H1AQ02539 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HIST1H1AQ02539 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.27□□□□□ -1.73
HIST1H1AQ02539 ODF3-202ENST00000342593 386 ntTSL 5 BASIC4.27□□□□□ -1.73
HIST1H1AQ02539 AL121886.1-201ENST00000358609 435 ntBASIC4.27□□□□□ -1.73
HIST1H1AQ02539 MIR130A-201ENST00000385274 89 ntBASIC4.27□□□□□ -1.73
HIST1H1AQ02539 U3.28-201ENST00000391249 210 ntBASIC4.27□□□□□ -1.73
HIST1H1AQ02539 AC233289.1-201ENST00000403700 508 ntBASIC4.27□□□□□ -1.73
HIST1H1AQ02539 AL096711.1-201ENST00000404780 554 ntBASIC4.27□□□□□ -1.73
HIST1H1AQ02539 AL133482.1-201ENST00000415988 498 ntBASIC4.27□□□□□ -1.73
HIST1H1AQ02539 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC4.27□□□□□ -1.73
HIST1H1AQ02539 BX284632.2-201ENST00000421091 399 ntBASIC4.27□□□□□ -1.73
HIST1H1AQ02539 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.27□□□□□ -1.73
HIST1H1AQ02539 AL512605.1-202ENST00000441919 381 ntBASIC4.27□□□□□ -1.73
HIST1H1AQ02539 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC4.27□□□□□ -1.73
HIST1H1AQ02539 AL359955.2-201ENST00000445380 353 ntBASIC4.27□□□□□ -1.73
HIST1H1AQ02539 AC073909.1-201ENST00000447112 999 ntBASIC4.27□□□□□ -1.73
HIST1H1AQ02539 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC4.27□□□□□ -1.73
HIST1H1AQ02539 CST12P-201ENST00000457644 362 ntBASIC4.27□□□□□ -1.73
HIST1H1AQ02539 ACA64.1-201ENST00000459171 127 ntBASIC4.27□□□□□ -1.73
HIST1H1AQ02539 ATP5LP5-201ENST00000483050 299 ntBASIC4.27□□□□□ -1.73
HIST1H1AQ02539 RN7SL346P-201ENST00000491561 294 ntBASIC4.27□□□□□ -1.73
HIST1H1AQ02539 RPS17P5-201ENST00000498293 408 ntBASIC4.27□□□□□ -1.73
HIST1H1AQ02539 AC092349.1-201ENST00000504903 310 ntBASIC4.27□□□□□ -1.73
HIST1H1AQ02539 AC074255.1-201ENST00000511259 501 ntBASIC4.27□□□□□ -1.73
HIST1H1AQ02539 APOBEC3AP1-201ENST00000511396 287 ntBASIC4.27□□□□□ -1.73
HIST1H1AQ02539 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.27□□□□□ -1.73
HIST1H1AQ02539 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.27□□□□□ -1.73
HIST1H1AQ02539 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC4.27□□□□□ -1.73
HIST1H1AQ02539 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC4.27□□□□□ -1.73
HIST1H1AQ02539 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC4.27□□□□□ -1.73
HIST1H1AQ02539 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC4.27□□□□□ -1.73
HIST1H1AQ02539 CYCSP38-201ENST00000559840 322 ntBASIC4.27□□□□□ -1.73
HIST1H1AQ02539 AC084759.1-201ENST00000561168 290 ntBASIC4.27□□□□□ -1.73
HIST1H1AQ02539 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.27□□□□□ -1.73
HIST1H1AQ02539 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC4.27□□□□□ -1.73
HIST1H1AQ02539 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.27□□□□□ -1.73
HIST1H1AQ02539 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
HIST1H1AQ02539 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC4.27□□□□□ -1.73
HIST1H1AQ02539 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC4.27□□□□□ -1.73
HIST1H1AQ02539 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC4.27□□□□□ -1.73
HIST1H1AQ02539 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
HIST1H1AQ02539 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HIST1H1AQ02539 ALB-220ENST00000621628 1606 ntTSL 5 BASIC4.27□□□□□ -1.73
HIST1H1AQ02539 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.27□□□□□ -1.73
HIST1H1AQ02539 RBPJP2-201ENST00000618187 1444 ntBASIC4.27□□□□□ -1.73
HIST1H1AQ02539 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.27□□□□□ -1.73
HIST1H1AQ02539 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
HIST1H1AQ02539 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
HIST1H1AQ02539 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.27□□□□□ -1.73
HIST1H1AQ02539 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
HIST1H1AQ02539 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HIST1H1AQ02539 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.26□□□□□ -1.73
HIST1H1AQ02539 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
HIST1H1AQ02539 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
HIST1H1AQ02539 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HIST1H1AQ02539 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HIST1H1AQ02539 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
HIST1H1AQ02539 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
HIST1H1AQ02539 RNU1-65P-201ENST00000363919 148 ntBASIC4.26□□□□□ -1.73
HIST1H1AQ02539 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
HIST1H1AQ02539 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC4.26□□□□□ -1.73
HIST1H1AQ02539 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.26□□□□□ -1.73
HIST1H1AQ02539 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC4.26□□□□□ -1.73
HIST1H1AQ02539 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC4.26□□□□□ -1.73
HIST1H1AQ02539 AC211486.3-201ENST00000412694 621 ntBASIC4.26□□□□□ -1.73
HIST1H1AQ02539 MRPL53P1-201ENST00000414323 319 ntBASIC4.26□□□□□ -1.73
HIST1H1AQ02539 NIFKP3-201ENST00000417799 865 ntBASIC4.26□□□□□ -1.73
HIST1H1AQ02539 AK4P4-201ENST00000419465 646 ntBASIC4.26□□□□□ -1.73
HIST1H1AQ02539 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
HIST1H1AQ02539 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC4.26□□□□□ -1.73
HIST1H1AQ02539 RPL34P6-201ENST00000432390 345 ntBASIC4.26□□□□□ -1.73
HIST1H1AQ02539 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC4.26□□□□□ -1.73
HIST1H1AQ02539 PCBP2P1-201ENST00000437262 977 ntBASIC4.26□□□□□ -1.73
HIST1H1AQ02539 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms