Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 AL589765.3-201ENST00000446084 462 ntBASIC5.6□□□□□ -1.51
CBX1P83916 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.6□□□□□ -1.51
CBX1P83916 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.6□□□□□ -1.51
CBX1P83916 AL450023.1-201ENST00000450868 751 ntBASIC5.6□□□□□ -1.51
CBX1P83916 HCG17-214ENST00000453558 732 ntTSL 5 BASIC5.6□□□□□ -1.51
CBX1P83916 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CBX1P83916 RPL9P15-201ENST00000491096 532 ntBASIC5.6□□□□□ -1.51
CBX1P83916 EIF4E2P2-201ENST00000492033 736 ntBASIC5.6□□□□□ -1.51
CBX1P83916 RNA5SP206-201ENST00000516703 121 ntBASIC5.6□□□□□ -1.51
CBX1P83916 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.6□□□□□ -1.51
CBX1P83916 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CBX1P83916 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.6□□□□□ -1.51
CBX1P83916 OR7E19P-202ENST00000589942 844 ntBASIC5.6□□□□□ -1.51
CBX1P83916 SNORA74.4-201ENST00000607595 199 ntBASIC5.6□□□□□ -1.51
CBX1P83916 SNX18P1Y-201ENST00000616231 511 ntBASIC5.6□□□□□ -1.51
CBX1P83916 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CBX1P83916 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CBX1P83916 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.6□□□□□ -1.51
CBX1P83916 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.59□□□□□ -1.51
CBX1P83916 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CBX1P83916 AC022306.1-201ENST00000560489 1562 ntBASIC5.59□□□□□ -1.51
CBX1P83916 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CBX1P83916 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CBX1P83916 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
CBX1P83916 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CBX1P83916 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.59□□□□□ -1.51
CBX1P83916 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.59□□□□□ -1.51
CBX1P83916 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CBX1P83916 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CBX1P83916 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CBX1P83916 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CBX1P83916 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CBX1P83916 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CBX1P83916 LEKR1-201ENST00000356539 2572 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
CBX1P83916 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CBX1P83916 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.59□□□□□ -1.51
CBX1P83916 RN7SKP257-201ENST00000364525 309 ntBASIC5.59□□□□□ -1.51
CBX1P83916 OR10R2-201ENST00000368152 1008 ntAPPRIS P2 BASIC5.59□□□□□ -1.51
CBX1P83916 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CBX1P83916 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CBX1P83916 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.59□□□□□ -1.51
CBX1P83916 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.59□□□□□ -1.51
CBX1P83916 RPS7P8-201ENST00000418311 581 ntBASIC5.59□□□□□ -1.51
CBX1P83916 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CBX1P83916 PTPN2P1-201ENST00000423212 1072 ntBASIC5.59□□□□□ -1.51
CBX1P83916 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.59□□□□□ -1.51
CBX1P83916 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC5.59□□□□□ -1.51
CBX1P83916 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC5.59□□□□□ -1.51
CBX1P83916 AL356133.1-201ENST00000444762 372 ntBASIC5.59□□□□□ -1.51
CBX1P83916 AC108751.2-201ENST00000469993 231 ntBASIC5.59□□□□□ -1.51
CBX1P83916 AC093827.1-201ENST00000480094 861 ntBASIC5.59□□□□□ -1.51
CBX1P83916 AC114956.3-202ENST00000505645 482 ntTSL 5 BASIC5.59□□□□□ -1.51
CBX1P83916 KHDC1P1-201ENST00000511053 508 ntBASIC5.59□□□□□ -1.51
CBX1P83916 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CBX1P83916 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.59□□□□□ -1.51
CBX1P83916 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC5.59□□□□□ -1.51
CBX1P83916 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.59□□□□□ -1.51
CBX1P83916 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CBX1P83916 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.59□□□□□ -1.51
CBX1P83916 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.59□□□□□ -1.51
CBX1P83916 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.59□□□□□ -1.51
CBX1P83916 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.59□□□□□ -1.51
CBX1P83916 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.59□□□□□ -1.51
CBX1P83916 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
CBX1P83916 OR1E3-201ENST00000575608 948 ntBASIC5.59□□□□□ -1.51
CBX1P83916 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.59□□□□□ -1.51
CBX1P83916 AC087468.1-201ENST00000604365 630 ntBASIC5.59□□□□□ -1.51
CBX1P83916 AC145423.1-201ENST00000605712 336 ntBASIC5.59□□□□□ -1.51
CBX1P83916 AL645933.2-201ENST00000606743 1207 ntBASIC5.59□□□□□ -1.51
CBX1P83916 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.59□□□□□ -1.51
CBX1P83916 AC244517.3-201ENST00000616254 1235 ntBASIC5.59□□□□□ -1.51
CBX1P83916 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.59□□□□□ -1.51
CBX1P83916 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
CBX1P83916 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.59□□□□□ -1.51
CBX1P83916 AC099654.6-201ENST00000636487 512 ntBASIC5.59□□□□□ -1.51
CBX1P83916 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.59□□□□□ -1.51
CBX1P83916 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.59□□□□□ -1.51
CBX1P83916 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CBX1P83916 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.59□□□□□ -1.52
CBX1P83916 AC079298.1-201ENST00000625026 1619 ntBASIC5.59□□□□□ -1.52
CBX1P83916 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CBX1P83916 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.59□□□□□ -1.52
CBX1P83916 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
CBX1P83916 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CBX1P83916 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
CBX1P83916 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.58□□□□□ -1.52
CBX1P83916 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
CBX1P83916 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
CBX1P83916 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
CBX1P83916 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CBX1P83916 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CBX1P83916 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CBX1P83916 RNA5SP308-201ENST00000362532 115 ntBASIC5.58□□□□□ -1.52
CBX1P83916 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.58□□□□□ -1.52
CBX1P83916 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC5.58□□□□□ -1.52
CBX1P83916 AL845321.1-201ENST00000444603 348 ntBASIC5.58□□□□□ -1.52
CBX1P83916 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.58□□□□□ -1.52
CBX1P83916 CYCSP34-201ENST00000458172 304 ntBASIC5.58□□□□□ -1.52
CBX1P83916 RPL23AP37-201ENST00000479658 549 ntBASIC5.58□□□□□ -1.52
CBX1P83916 AL079303.1-201ENST00000486611 463 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms