Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CCL20P78556 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC4.17□□□□□ -1.74
CCL20P78556 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC4.17□□□□□ -1.74
CCL20P78556 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.17□□□□□ -1.74
CCL20P78556 LRP4-AS1-202ENST00000531719 731 ntTSL 4 BASIC4.17□□□□□ -1.74
CCL20P78556 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC4.17□□□□□ -1.74
CCL20P78556 AC068408.1-201ENST00000577406 1144 ntBASIC4.17□□□□□ -1.74
CCL20P78556 MIR4776-2-201ENST00000580204 80 ntBASIC4.17□□□□□ -1.74
CCL20P78556 AC009027.1-201ENST00000604510 479 ntBASIC4.17□□□□□ -1.74
CCL20P78556 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.17□□□□□ -1.74
CCL20P78556 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.17□□□□□ -1.74
CCL20P78556 AP005431.1-201ENST00000618479 319 ntBASIC4.17□□□□□ -1.74
CCL20P78556 AC018558.4-201ENST00000622153 281 ntBASIC4.17□□□□□ -1.74
CCL20P78556 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCL20P78556 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CCL20P78556 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC4.17□□□□□ -1.74
CCL20P78556 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.17□□□□□ -1.74
CCL20P78556 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC4.17□□□□□ -1.74
CCL20P78556 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CCL20P78556 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCL20P78556 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
CCL20P78556 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCL20P78556 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CCL20P78556 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCL20P78556 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCL20P78556 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CCL20P78556 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.16□□□□□ -1.74
CCL20P78556 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
CCL20P78556 EEF1A1P14-201ENST00000421195 1376 ntBASIC4.16□□□□□ -1.74
CCL20P78556 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.16□□□□□ -1.74
CCL20P78556 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.16□□□□□ -1.74
CCL20P78556 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCL20P78556 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CCL20P78556 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC4.16□□□□□ -1.74
CCL20P78556 RNU1-65P-201ENST00000363919 148 ntBASIC4.16□□□□□ -1.74
CCL20P78556 RN7SKP292-201ENST00000365522 317 ntBASIC4.16□□□□□ -1.74
CCL20P78556 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC4.16□□□□□ -1.74
CCL20P78556 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC4.16□□□□□ -1.74
CCL20P78556 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.16□□□□□ -1.74
CCL20P78556 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC4.16□□□□□ -1.74
CCL20P78556 AL050305.1-201ENST00000399993 1230 ntBASIC4.16□□□□□ -1.74
CCL20P78556 AL117344.1-201ENST00000407196 616 ntBASIC4.16□□□□□ -1.74
CCL20P78556 RN7SKP199-201ENST00000410325 305 ntBASIC4.16□□□□□ -1.74
CCL20P78556 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.16□□□□□ -1.74
CCL20P78556 AC013429.2-201ENST00000418798 781 ntBASIC4.16□□□□□ -1.74
CCL20P78556 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.16□□□□□ -1.74
CCL20P78556 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC4.16□□□□□ -1.74
CCL20P78556 AKR1B10P1-201ENST00000425765 942 ntBASIC4.16□□□□□ -1.74
CCL20P78556 AL138479.1-201ENST00000426913 484 ntBASIC4.16□□□□□ -1.74
CCL20P78556 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC4.16□□□□□ -1.74
CCL20P78556 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
CCL20P78556 MRPL35P2-201ENST00000448009 511 ntBASIC4.16□□□□□ -1.74
CCL20P78556 RPL31P11-202ENST00000454082 372 ntBASIC4.16□□□□□ -1.74
CCL20P78556 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
CCL20P78556 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.16□□□□□ -1.74
CCL20P78556 AP002453.1-201ENST00000492327 668 ntBASIC4.16□□□□□ -1.74
CCL20P78556 HMGN1P17-201ENST00000513734 295 ntBASIC4.16□□□□□ -1.74
CCL20P78556 RN7SKP46-201ENST00000515942 234 ntBASIC4.16□□□□□ -1.74
CCL20P78556 HNRNPRP2-201ENST00000528421 743 ntBASIC4.16□□□□□ -1.74
CCL20P78556 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC4.16□□□□□ -1.74
CCL20P78556 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC4.16□□□□□ -1.74
CCL20P78556 MIR4258-201ENST00000580920 91 ntBASIC4.16□□□□□ -1.74
CCL20P78556 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC4.16□□□□□ -1.74
CCL20P78556 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC4.16□□□□□ -1.74
CCL20P78556 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC4.16□□□□□ -1.74
CCL20P78556 AC073389.3-201ENST00000609434 935 ntBASIC4.16□□□□□ -1.74
CCL20P78556 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC4.16□□□□□ -1.74
CCL20P78556 AC089999.3-201ENST00000622440 577 ntBASIC4.16□□□□□ -1.74
CCL20P78556 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
CCL20P78556 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCL20P78556 AP001273.1-201ENST00000624493 3152 ntBASIC4.16□□□□□ -1.74
CCL20P78556 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
CCL20P78556 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CCL20P78556 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CCL20P78556 PDZK1P1-202ENST00000425209 1350 ntBASIC4.15□□□□□ -1.74
CCL20P78556 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
CCL20P78556 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.15□□□□□ -1.74
CCL20P78556 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.74
CCL20P78556 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.15□□□□□ -1.74
CCL20P78556 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
CCL20P78556 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.74
CCL20P78556 AC023421.1-201ENST00000590535 1785 ntBASIC4.15□□□□□ -1.74
CCL20P78556 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.15□□□□□ -1.74
CCL20P78556 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC4.15□□□□□ -1.74
CCL20P78556 IFIT1P1-201ENST00000400497 1449 ntBASIC4.15□□□□□ -1.74
CCL20P78556 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
CCL20P78556 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CCL20P78556 RN7SKP153-201ENST00000365026 316 ntBASIC4.15□□□□□ -1.75
CCL20P78556 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CCL20P78556 MIR589-201ENST00000385238 99 ntBASIC4.15□□□□□ -1.75
CCL20P78556 U3.32-201ENST00000408116 212 ntBASIC4.15□□□□□ -1.75
CCL20P78556 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC4.15□□□□□ -1.75
CCL20P78556 RANP7-201ENST00000418085 644 ntBASIC4.15□□□□□ -1.75
CCL20P78556 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.15□□□□□ -1.75
CCL20P78556 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.15□□□□□ -1.75
CCL20P78556 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.15□□□□□ -1.75
CCL20P78556 AC005077.1-201ENST00000449226 375 ntBASIC4.15□□□□□ -1.75
CCL20P78556 BX842559.2-201ENST00000451418 605 ntBASIC4.15□□□□□ -1.75
CCL20P78556 AL035090.1-201ENST00000454835 332 ntBASIC4.15□□□□□ -1.75
CCL20P78556 AL356981.1-201ENST00000454879 684 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms