Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
NKX6-1P78426 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
NKX6-1P78426 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
NKX6-1P78426 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC5.76□□□□□ -1.49
NKX6-1P78426 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NKX6-1P78426 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC5.76□□□□□ -1.49
NKX6-1P78426 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
NKX6-1P78426 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NKX6-1P78426 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NKX6-1P78426 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.76□□□□□ -1.49
NKX6-1P78426 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC5.76□□□□□ -1.49
NKX6-1P78426 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
NKX6-1P78426 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NKX6-1P78426 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC5.76□□□□□ -1.49
NKX6-1P78426 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC5.76□□□□□ -1.49
NKX6-1P78426 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NKX6-1P78426 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NKX6-1P78426 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
NKX6-1P78426 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.76□□□□□ -1.49
NKX6-1P78426 AC119751.3-201ENST00000399720 670 ntBASIC5.76□□□□□ -1.49
NKX6-1P78426 RPL12P23-201ENST00000405880 490 ntBASIC5.76□□□□□ -1.49
NKX6-1P78426 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC5.76□□□□□ -1.49
NKX6-1P78426 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.76□□□□□ -1.49
NKX6-1P78426 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.76□□□□□ -1.49
NKX6-1P78426 AC107081.1-201ENST00000414975 361 ntBASIC5.76□□□□□ -1.49
NKX6-1P78426 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC5.76□□□□□ -1.49
NKX6-1P78426 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC5.76□□□□□ -1.49
NKX6-1P78426 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC5.76□□□□□ -1.49
NKX6-1P78426 RPS7P12-201ENST00000422385 582 ntBASIC5.76□□□□□ -1.49
NKX6-1P78426 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC5.76□□□□□ -1.49
NKX6-1P78426 VN1R20P-201ENST00000425215 966 ntBASIC5.76□□□□□ -1.49
NKX6-1P78426 AC021876.1-201ENST00000425959 359 ntBASIC5.76□□□□□ -1.49
NKX6-1P78426 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC5.76□□□□□ -1.49
NKX6-1P78426 AC092106.2-201ENST00000436597 487 ntBASIC5.76□□□□□ -1.49
NKX6-1P78426 ARMC4P1-201ENST00000438905 707 ntBASIC5.76□□□□□ -1.49
NKX6-1P78426 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NKX6-1P78426 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC5.76□□□□□ -1.49
NKX6-1P78426 MTCYBP42-201ENST00000444653 1130 ntBASIC5.76□□□□□ -1.49
NKX6-1P78426 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC5.76□□□□□ -1.49
NKX6-1P78426 RNU7-27P-201ENST00000459281 62 ntBASIC5.76□□□□□ -1.49
NKX6-1P78426 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.76□□□□□ -1.49
NKX6-1P78426 RPL23AP37-201ENST00000479658 549 ntBASIC5.76□□□□□ -1.49
NKX6-1P78426 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.76□□□□□ -1.49
NKX6-1P78426 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.76□□□□□ -1.49
NKX6-1P78426 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC5.76□□□□□ -1.49
NKX6-1P78426 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.76□□□□□ -1.49
NKX6-1P78426 AC011411.1-201ENST00000509592 876 ntBASIC5.76□□□□□ -1.49
NKX6-1P78426 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NKX6-1P78426 RN7SKP253-201ENST00000516424 309 ntBASIC5.76□□□□□ -1.49
NKX6-1P78426 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.76□□□□□ -1.49
NKX6-1P78426 DEFB130C-202ENST00000530001 230 ntBASIC5.76□□□□□ -1.49
NKX6-1P78426 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.76□□□□□ -1.49
NKX6-1P78426 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.76□□□□□ -1.49
NKX6-1P78426 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.76□□□□□ -1.49
NKX6-1P78426 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
NKX6-1P78426 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
NKX6-1P78426 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC5.76□□□□□ -1.49
NKX6-1P78426 AC145350.1-201ENST00000567426 208 ntBASIC5.76□□□□□ -1.49
NKX6-1P78426 AC106785.4-201ENST00000569492 412 ntBASIC5.76□□□□□ -1.49
NKX6-1P78426 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC5.76□□□□□ -1.49
NKX6-1P78426 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NKX6-1P78426 AC245052.7-201ENST00000601161 359 ntBASIC5.76□□□□□ -1.49
NKX6-1P78426 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.76□□□□□ -1.49
NKX6-1P78426 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.76□□□□□ -1.49
NKX6-1P78426 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
NKX6-1P78426 STARD13-AS-232ENST00000609137 882 ntTSL 5 BASIC5.76□□□□□ -1.49
NKX6-1P78426 AL136097.3-201ENST00000611097 505 ntBASIC5.76□□□□□ -1.49
NKX6-1P78426 VN1R74P-201ENST00000613259 503 ntBASIC5.76□□□□□ -1.49
NKX6-1P78426 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.76□□□□□ -1.49
NKX6-1P78426 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC5.76□□□□□ -1.49
NKX6-1P78426 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.76□□□□□ -1.49
NKX6-1P78426 AL122023.1-201ENST00000622847 530 ntBASIC5.76□□□□□ -1.49
NKX6-1P78426 UGP2-231ENST00000627474 264 ntTSL 5 BASIC5.76□□□□□ -1.49
NKX6-1P78426 CU459211.1-201ENST00000635667 749 ntBASIC5.76□□□□□ -1.49
NKX6-1P78426 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC5.76□□□□□ -1.49
NKX6-1P78426 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC5.76□□□□□ -1.49
NKX6-1P78426 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC5.76□□□□□ -1.49
NKX6-1P78426 MTND4P8-201ENST00000514997 1362 ntBASIC5.76□□□□□ -1.49
NKX6-1P78426 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
NKX6-1P78426 AC022034.1-201ENST00000512867 2156 ntBASIC5.76□□□□□ -1.49
NKX6-1P78426 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
NKX6-1P78426 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
NKX6-1P78426 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
NKX6-1P78426 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NKX6-1P78426 CCT8P1-201ENST00000413611 1657 ntBASIC5.75□□□□□ -1.49
NKX6-1P78426 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
NKX6-1P78426 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
NKX6-1P78426 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC5.75□□□□□ -1.49
NKX6-1P78426 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NKX6-1P78426 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
NKX6-1P78426 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
NKX6-1P78426 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.75□□□□□ -1.49
NKX6-1P78426 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
NKX6-1P78426 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
NKX6-1P78426 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
NKX6-1P78426 SMG1P5-202ENST00000529428 4219 ntBASIC5.75□□□□□ -1.49
NKX6-1P78426 SMG1P2-201ENST00000566127 4221 ntBASIC5.75□□□□□ -1.49
NKX6-1P78426 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.75□□□□□ -1.49
NKX6-1P78426 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.75□□□□□ -1.49
NKX6-1P78426 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms