Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN20P56880 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN20P56880 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN20P56880 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN20P56880 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN20P56880 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLDN20P56880 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CLDN20P56880 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.32□□□□□ -1.56
CLDN20P56880 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.32□□□□□ -1.56
CLDN20P56880 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.32□□□□□ -1.56
CLDN20P56880 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN20P56880 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.32□□□□□ -1.56
CLDN20P56880 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.32□□□□□ -1.56
CLDN20P56880 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN20P56880 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN20P56880 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN20P56880 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
CLDN20P56880 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
CLDN20P56880 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN20P56880 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN20P56880 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CLDN20P56880 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN20P56880 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN20P56880 SNORD51.1-201ENST00000365405 77 ntBASIC5.32□□□□□ -1.56
CLDN20P56880 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN20P56880 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CLDN20P56880 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CLDN20P56880 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.32□□□□□ -1.56
CLDN20P56880 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN20P56880 METTL15P3-201ENST00000415522 1221 ntBASIC5.32□□□□□ -1.56
CLDN20P56880 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.32□□□□□ -1.56
CLDN20P56880 SETP9-201ENST00000423837 832 ntBASIC5.32□□□□□ -1.56
CLDN20P56880 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.32□□□□□ -1.56
CLDN20P56880 MTCO1P51-201ENST00000427672 1060 ntBASIC5.32□□□□□ -1.56
CLDN20P56880 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.32□□□□□ -1.56
CLDN20P56880 RPS12P17-201ENST00000438591 377 ntBASIC5.32□□□□□ -1.56
CLDN20P56880 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.32□□□□□ -1.56
CLDN20P56880 RPL12P11-201ENST00000439970 501 ntBASIC5.32□□□□□ -1.56
CLDN20P56880 Z99127.2-201ENST00000441426 334 ntBASIC5.32□□□□□ -1.56
CLDN20P56880 CUBNP2-201ENST00000443534 1139 ntBASIC5.32□□□□□ -1.56
CLDN20P56880 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC5.32□□□□□ -1.56
CLDN20P56880 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.32□□□□□ -1.56
CLDN20P56880 AC084754.1-201ENST00000463466 464 ntBASIC5.32□□□□□ -1.56
CLDN20P56880 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN20P56880 RN7SL57P-201ENST00000493687 290 ntBASIC5.32□□□□□ -1.56
CLDN20P56880 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.32□□□□□ -1.56
CLDN20P56880 AC090568.1-201ENST00000509499 856 ntBASIC5.32□□□□□ -1.56
CLDN20P56880 AC027338.1-201ENST00000514840 825 ntBASIC5.32□□□□□ -1.56
CLDN20P56880 RN7SKP288-201ENST00000516227 268 ntBASIC5.32□□□□□ -1.56
CLDN20P56880 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.32□□□□□ -1.56
CLDN20P56880 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.32□□□□□ -1.56
CLDN20P56880 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.32□□□□□ -1.56
CLDN20P56880 CKS1BP1-201ENST00000555221 240 ntBASIC5.32□□□□□ -1.56
CLDN20P56880 AL356801.1-201ENST00000559320 294 ntBASIC5.32□□□□□ -1.56
CLDN20P56880 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.32□□□□□ -1.56
CLDN20P56880 GARSP1-201ENST00000570895 719 ntBASIC5.32□□□□□ -1.56
CLDN20P56880 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.32□□□□□ -1.56
CLDN20P56880 MIR4310-201ENST00000582950 57 ntBASIC5.32□□□□□ -1.56
CLDN20P56880 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.32□□□□□ -1.56
CLDN20P56880 AC027243.2-201ENST00000602530 724 ntBASIC5.32□□□□□ -1.56
CLDN20P56880 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC5.32□□□□□ -1.56
CLDN20P56880 AC100767.2-201ENST00000604840 693 ntBASIC5.32□□□□□ -1.56
CLDN20P56880 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.32□□□□□ -1.56
CLDN20P56880 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN20P56880 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.32□□□□□ -1.56
CLDN20P56880 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.32□□□□□ -1.56
CLDN20P56880 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN20P56880 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CLDN20P56880 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CLDN20P56880 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CLDN20P56880 AC005224.3-201ENST00000584683 2140 ntBASIC5.32□□□□□ -1.56
CLDN20P56880 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.32□□□□□ -1.56
CLDN20P56880 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.32□□□□□ -1.56
CLDN20P56880 BRAFP1-201ENST00000445336 2703 ntBASIC5.32□□□□□ -1.56
CLDN20P56880 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
CLDN20P56880 AL161756.3-201ENST00000641216 2071 ntBASIC5.32□□□□□ -1.56
CLDN20P56880 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.31□□□□□ -1.56
CLDN20P56880 THAP12P9-201ENST00000503971 2360 ntBASIC5.31□□□□□ -1.56
CLDN20P56880 AL158152.1-201ENST00000602652 1435 ntBASIC5.31□□□□□ -1.56
CLDN20P56880 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.31□□□□□ -1.56
CLDN20P56880 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN20P56880 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN20P56880 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN20P56880 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN20P56880 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN20P56880 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CLDN20P56880 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.31□□□□□ -1.56
CLDN20P56880 AC010266.2-201ENST00000564741 3255 ntBASIC5.31□□□□□ -1.56
CLDN20P56880 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CLDN20P56880 AC023490.2-201ENST00000359859 470 ntBASIC5.31□□□□□ -1.56
CLDN20P56880 RNA5SP510-201ENST00000364697 99 ntBASIC5.31□□□□□ -1.56
CLDN20P56880 RNU6-40P-201ENST00000384254 107 ntBASIC5.31□□□□□ -1.56
CLDN20P56880 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
CLDN20P56880 AL356057.1-202ENST00000402263 756 ntBASIC5.31□□□□□ -1.56
CLDN20P56880 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.31□□□□□ -1.56
CLDN20P56880 AL035660.1-201ENST00000422041 222 ntBASIC5.31□□□□□ -1.56
CLDN20P56880 UBE2V1P6-201ENST00000430840 422 ntBASIC5.31□□□□□ -1.56
CLDN20P56880 RPS29P14-201ENST00000431518 171 ntBASIC5.31□□□□□ -1.56
CLDN20P56880 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC5.31□□□□□ -1.56
CLDN20P56880 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms