Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC6.05□□□□□ -1.44
HDAC4P56524 AL163952.1-202ENST00000569625 600 ntBASIC6.05□□□□□ -1.44
HDAC4P56524 MIR4443-201ENST00000585052 53 ntBASIC6.05□□□□□ -1.44
HDAC4P56524 RPL21P136-201ENST00000605378 396 ntBASIC6.05□□□□□ -1.44
HDAC4P56524 AL031601.1-201ENST00000605702 394 ntBASIC6.05□□□□□ -1.44
HDAC4P56524 AC008833.1-201ENST00000611633 691 ntBASIC6.05□□□□□ -1.44
HDAC4P56524 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.05□□□□□ -1.44
HDAC4P56524 AC129778.1-202ENST00000623812 261 ntBASIC6.05□□□□□ -1.44
HDAC4P56524 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.05□□□□□ -1.44
HDAC4P56524 AL591379.1-207ENST00000635982 261 ntBASIC6.05□□□□□ -1.44
HDAC4P56524 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.05□□□□□ -1.44
HDAC4P56524 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.05□□□□□ -1.44
HDAC4P56524 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.05□□□□□ -1.44
HDAC4P56524 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HDAC4P56524 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HDAC4P56524 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
HDAC4P56524 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HDAC4P56524 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
HDAC4P56524 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
HDAC4P56524 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
HDAC4P56524 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HDAC4P56524 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.04□□□□□ -1.44
HDAC4P56524 RNU6-670P-201ENST00000364312 104 ntBASIC6.04□□□□□ -1.44
HDAC4P56524 RNA5SP91-201ENST00000390902 119 ntBASIC6.04□□□□□ -1.44
HDAC4P56524 EI24P3-201ENST00000399046 1062 ntBASIC6.04□□□□□ -1.44
HDAC4P56524 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.04□□□□□ -1.44
HDAC4P56524 AL357752.1-201ENST00000412817 349 ntBASIC6.04□□□□□ -1.44
HDAC4P56524 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC6.04□□□□□ -1.44
HDAC4P56524 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC6.04□□□□□ -1.44
HDAC4P56524 AJ239321.1-201ENST00000424255 564 ntBASIC6.04□□□□□ -1.44
HDAC4P56524 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC6.04□□□□□ -1.44
HDAC4P56524 CRIP1P1-201ENST00000427567 185 ntBASIC6.04□□□□□ -1.44
HDAC4P56524 FTLP19-201ENST00000433300 394 ntBASIC6.04□□□□□ -1.44
HDAC4P56524 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.04□□□□□ -1.44
HDAC4P56524 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.04□□□□□ -1.44
HDAC4P56524 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HDAC4P56524 RNU1-88P-201ENST00000459274 128 ntBASIC6.04□□□□□ -1.44
HDAC4P56524 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC6.04□□□□□ -1.44
HDAC4P56524 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HDAC4P56524 AC105384.2-201ENST00000508433 640 ntBASIC6.04□□□□□ -1.44
HDAC4P56524 AC139365.2-201ENST00000517972 253 ntBASIC6.04□□□□□ -1.44
HDAC4P56524 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC6.04□□□□□ -1.44
HDAC4P56524 EIF4A2P3-201ENST00000525903 1055 ntBASIC6.04□□□□□ -1.44
HDAC4P56524 HMGN2P36-201ENST00000529541 409 ntBASIC6.04□□□□□ -1.44
HDAC4P56524 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.04□□□□□ -1.44
HDAC4P56524 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.04□□□□□ -1.44
HDAC4P56524 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.04□□□□□ -1.44
HDAC4P56524 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.04□□□□□ -1.44
HDAC4P56524 FAM60CP-201ENST00000591086 664 ntBASIC6.04□□□□□ -1.44
HDAC4P56524 AL513327.3-201ENST00000602618 469 ntBASIC6.04□□□□□ -1.44
HDAC4P56524 AC067773.1-201ENST00000603284 1094 ntBASIC6.04□□□□□ -1.44
HDAC4P56524 AL133481.2-203ENST00000607558 139 ntBASIC6.04□□□□□ -1.44
HDAC4P56524 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC6.04□□□□□ -1.44
HDAC4P56524 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.04□□□□□ -1.44
HDAC4P56524 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HDAC4P56524 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
HDAC4P56524 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
HDAC4P56524 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HDAC4P56524 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
HDAC4P56524 AC011933.2-201ENST00000578539 2790 ntBASIC6.04□□□□□ -1.44
HDAC4P56524 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HDAC4P56524 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HDAC4P56524 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
HDAC4P56524 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
HDAC4P56524 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HDAC4P56524 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HDAC4P56524 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HDAC4P56524 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
HDAC4P56524 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HDAC4P56524 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.03□□□□□ -1.44
HDAC4P56524 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
HDAC4P56524 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC6.03□□□□□ -1.44
HDAC4P56524 RNU6-697P-201ENST00000363348 107 ntBASIC6.03□□□□□ -1.44
HDAC4P56524 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
HDAC4P56524 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
HDAC4P56524 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.03□□□□□ -1.44
HDAC4P56524 VTI1BP4-201ENST00000427516 527 ntBASIC6.03□□□□□ -1.44
HDAC4P56524 AC126120.1-201ENST00000431082 470 ntBASIC6.03□□□□□ -1.44
HDAC4P56524 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC6.03□□□□□ -1.44
HDAC4P56524 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.03□□□□□ -1.44
HDAC4P56524 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.03□□□□□ -1.44
HDAC4P56524 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
HDAC4P56524 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
HDAC4P56524 ST13P12-201ENST00000508958 1094 ntBASIC6.03□□□□□ -1.44
HDAC4P56524 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.03□□□□□ -1.44
HDAC4P56524 AC006499.4-201ENST00000510947 694 ntBASIC6.03□□□□□ -1.44
HDAC4P56524 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC6.03□□□□□ -1.44
HDAC4P56524 AC117525.1-201ENST00000515228 503 ntBASIC6.03□□□□□ -1.44
HDAC4P56524 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.03□□□□□ -1.44
HDAC4P56524 AC104997.1-201ENST00000519761 717 ntBASIC6.03□□□□□ -1.44
HDAC4P56524 IGKV3D-34-201ENST00000522638 302 ntBASIC6.03□□□□□ -1.44
HDAC4P56524 AC136777.2-201ENST00000522979 358 ntBASIC6.03□□□□□ -1.44
HDAC4P56524 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.03□□□□□ -1.44
HDAC4P56524 RERGL-202ENST00000536890 367 ntTSL 3 BASIC6.03□□□□□ -1.44
HDAC4P56524 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
HDAC4P56524 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.03□□□□□ -1.44
HDAC4P56524 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.03□□□□□ -1.44
HDAC4P56524 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC6.03□□□□□ -1.44
HDAC4P56524 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.03□□□□□ -1.44
HDAC4P56524 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms