Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
GFRA1P56159 METTL5-202ENST00000308099 629 ntTSL 3 BASIC6.18□□□□□ -1.42
GFRA1P56159 AC092634.1-201ENST00000366505 199 ntBASIC6.18□□□□□ -1.42
GFRA1P56159 MIR16-1-201ENST00000385271 89 ntBASIC6.18□□□□□ -1.42
GFRA1P56159 VDAC2P1-201ENST00000399358 958 ntBASIC6.18□□□□□ -1.42
GFRA1P56159 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
GFRA1P56159 AL663109.1-201ENST00000411498 844 ntBASIC6.18□□□□□ -1.42
GFRA1P56159 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC6.18□□□□□ -1.42
GFRA1P56159 MTCO2P34-201ENST00000421994 607 ntBASIC6.18□□□□□ -1.42
GFRA1P56159 SPATA20P1-201ENST00000423089 438 ntBASIC6.18□□□□□ -1.42
GFRA1P56159 AC000089.1-201ENST00000424559 801 ntBASIC6.18□□□□□ -1.42
GFRA1P56159 AP003385.1-201ENST00000426387 893 ntBASIC6.18□□□□□ -1.42
GFRA1P56159 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6.18□□□□□ -1.42
GFRA1P56159 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC6.18□□□□□ -1.42
GFRA1P56159 SEPT7P5-201ENST00000434048 306 ntBASIC6.18□□□□□ -1.42
GFRA1P56159 MTND1P30-201ENST00000441241 901 ntBASIC6.18□□□□□ -1.42
GFRA1P56159 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.18□□□□□ -1.42
GFRA1P56159 PPIAP32-201ENST00000449940 472 ntBASIC6.18□□□□□ -1.42
GFRA1P56159 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC6.18□□□□□ -1.42
GFRA1P56159 RPL31P11-202ENST00000454082 372 ntBASIC6.18□□□□□ -1.42
GFRA1P56159 RNU6-956P-201ENST00000458868 103 ntBASIC6.18□□□□□ -1.42
GFRA1P56159 CCDC75P1-201ENST00000469247 791 ntBASIC6.18□□□□□ -1.42
GFRA1P56159 AL024509.2-201ENST00000493462 493 ntBASIC6.18□□□□□ -1.42
GFRA1P56159 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC6.18□□□□□ -1.42
GFRA1P56159 LTV1P1-201ENST00000510683 1237 ntBASIC6.18□□□□□ -1.42
GFRA1P56159 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC6.18□□□□□ -1.42
GFRA1P56159 IGKV2D-38-201ENST00000518423 240 ntBASIC6.18□□□□□ -1.42
GFRA1P56159 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC6.18□□□□□ -1.42
GFRA1P56159 SMARCE1P4-201ENST00000523647 241 ntBASIC6.18□□□□□ -1.42
GFRA1P56159 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
GFRA1P56159 RERGL-202ENST00000536890 367 ntTSL 3 BASIC6.18□□□□□ -1.42
GFRA1P56159 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC6.18□□□□□ -1.42
GFRA1P56159 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC6.18□□□□□ -1.42
GFRA1P56159 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.18□□□□□ -1.42
GFRA1P56159 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.18□□□□□ -1.42
GFRA1P56159 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC6.18□□□□□ -1.42
GFRA1P56159 U73023.1-201ENST00000603134 700 ntBASIC6.18□□□□□ -1.42
GFRA1P56159 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC6.18□□□□□ -1.42
GFRA1P56159 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.18□□□□□ -1.42
GFRA1P56159 AC005332.10-201ENST00000612725 619 ntBASIC6.18□□□□□ -1.42
GFRA1P56159 AC015540.1-201ENST00000615828 501 ntBASIC6.18□□□□□ -1.42
GFRA1P56159 MIR6849-201ENST00000618543 69 ntBASIC6.18□□□□□ -1.42
GFRA1P56159 AC005840.5-201ENST00000619166 599 ntBASIC6.18□□□□□ -1.42
GFRA1P56159 AC099842.1-201ENST00000619919 596 ntBASIC6.18□□□□□ -1.42
GFRA1P56159 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC6.18□□□□□ -1.42
GFRA1P56159 AC130448.2-201ENST00000624082 374 ntBASIC6.18□□□□□ -1.42
GFRA1P56159 AC005858.3-201ENST00000624756 589 ntBASIC6.18□□□□□ -1.42
GFRA1P56159 AC135068.11-201ENST00000636378 921 ntBASIC6.18□□□□□ -1.42
GFRA1P56159 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
GFRA1P56159 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
GFRA1P56159 AC078880.4-201ENST00000617627 1749 ntBASIC6.18□□□□□ -1.42
GFRA1P56159 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
GFRA1P56159 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
GFRA1P56159 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
GFRA1P56159 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
GFRA1P56159 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
GFRA1P56159 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC6.18□□□□□ -1.42
GFRA1P56159 AC109315.1-201ENST00000584143 1347 ntBASIC6.18□□□□□ -1.42
GFRA1P56159 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
GFRA1P56159 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
GFRA1P56159 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
GFRA1P56159 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
GFRA1P56159 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
GFRA1P56159 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
GFRA1P56159 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
GFRA1P56159 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC6.18□□□□□ -1.42
GFRA1P56159 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
GFRA1P56159 AL671511.1-201ENST00000425033 3458 ntTSL 2 BASIC6.18□□□□□ -1.42
GFRA1P56159 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
GFRA1P56159 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
GFRA1P56159 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
GFRA1P56159 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
GFRA1P56159 AC004023.1-201ENST00000561473 1744 ntBASIC6.17□□□□□ -1.42
GFRA1P56159 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC6.17□□□□□ -1.42
GFRA1P56159 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
GFRA1P56159 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
GFRA1P56159 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
GFRA1P56159 AL672167.1-206ENST00000356293 943 ntBASIC6.17□□□□□ -1.42
GFRA1P56159 Y_RNA.311-201ENST00000365068 96 ntBASIC6.17□□□□□ -1.42
GFRA1P56159 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
GFRA1P56159 AC008171.1-201ENST00000395058 200 ntBASIC6.17□□□□□ -1.42
GFRA1P56159 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
GFRA1P56159 AL353133.1-201ENST00000407695 401 ntBASIC6.17□□□□□ -1.42
GFRA1P56159 RN7SKP108-201ENST00000411367 328 ntBASIC6.17□□□□□ -1.42
GFRA1P56159 PGBD4P8-201ENST00000412993 562 ntBASIC6.17□□□□□ -1.42
GFRA1P56159 RPSAP60-201ENST00000415403 880 ntBASIC6.17□□□□□ -1.42
GFRA1P56159 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.17□□□□□ -1.42
GFRA1P56159 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC6.17□□□□□ -1.42
GFRA1P56159 RPL7P44-201ENST00000424827 742 ntBASIC6.17□□□□□ -1.42
GFRA1P56159 RPS10P21-201ENST00000430654 475 ntBASIC6.17□□□□□ -1.42
GFRA1P56159 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC6.17□□□□□ -1.42
GFRA1P56159 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.17□□□□□ -1.42
GFRA1P56159 AC083855.1-201ENST00000440041 258 ntBASIC6.17□□□□□ -1.42
GFRA1P56159 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC6.17□□□□□ -1.42
GFRA1P56159 MTCO1P19-201ENST00000443487 500 ntBASIC6.17□□□□□ -1.42
GFRA1P56159 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC6.17□□□□□ -1.42
GFRA1P56159 SRRM1P2-201ENST00000464531 1192 ntBASIC6.17□□□□□ -1.42
GFRA1P56159 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
GFRA1P56159 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
GFRA1P56159 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms