Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
PKNOX1P55347 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
PKNOX1P55347 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PKNOX1P55347 Z83820.1-201ENST00000456978 1499 ntBASIC5.34□□□□□ -1.55
PKNOX1P55347 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.34□□□□□ -1.55
PKNOX1P55347 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.34□□□□□ -1.55
PKNOX1P55347 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PKNOX1P55347 AC093849.1-201ENST00000563631 2209 ntBASIC5.34□□□□□ -1.55
PKNOX1P55347 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
PKNOX1P55347 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
PKNOX1P55347 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PKNOX1P55347 MIR551A-201ENST00000385042 96 ntBASIC5.34□□□□□ -1.55
PKNOX1P55347 AC245060.4-201ENST00000413293 1121 ntBASIC5.34□□□□□ -1.55
PKNOX1P55347 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PKNOX1P55347 RPL7AP49-201ENST00000429522 581 ntBASIC5.34□□□□□ -1.55
PKNOX1P55347 AL591438.1-201ENST00000433508 581 ntBASIC5.34□□□□□ -1.55
PKNOX1P55347 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.34□□□□□ -1.55
PKNOX1P55347 AC110602.1-201ENST00000437414 318 ntBASIC5.34□□□□□ -1.55
PKNOX1P55347 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.34□□□□□ -1.55
PKNOX1P55347 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.34□□□□□ -1.55
PKNOX1P55347 OR52E3P-201ENST00000452083 936 ntBASIC5.34□□□□□ -1.55
PKNOX1P55347 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.34□□□□□ -1.55
PKNOX1P55347 MRE11P1-201ENST00000464884 2127 ntBASIC5.34□□□□□ -1.55
PKNOX1P55347 AP002884.1-201ENST00000479691 655 ntBASIC5.34□□□□□ -1.55
PKNOX1P55347 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.34□□□□□ -1.55
PKNOX1P55347 RNU6-615P-201ENST00000516065 106 ntBASIC5.34□□□□□ -1.55
PKNOX1P55347 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.34□□□□□ -1.55
PKNOX1P55347 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.34□□□□□ -1.55
PKNOX1P55347 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PKNOX1P55347 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.34□□□□□ -1.55
PKNOX1P55347 MIR6889-201ENST00000613185 59 ntBASIC5.34□□□□□ -1.55
PKNOX1P55347 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.34□□□□□ -1.55
PKNOX1P55347 FO681491.1-202ENST00000623392 737 ntBASIC5.34□□□□□ -1.55
PKNOX1P55347 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.34□□□□□ -1.55
PKNOX1P55347 AC138965.3-201ENST00000623875 498 ntBASIC5.34□□□□□ -1.55
PKNOX1P55347 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.34□□□□□ -1.55
PKNOX1P55347 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.34□□□□□ -1.55
PKNOX1P55347 AC073869.8-201ENST00000641806 335 ntBASIC5.34□□□□□ -1.55
PKNOX1P55347 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PKNOX1P55347 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.34□□□□□ -1.55
PKNOX1P55347 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PKNOX1P55347 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.34□□□□□ -1.56
PKNOX1P55347 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.56
PKNOX1P55347 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.56
PKNOX1P55347 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.56
PKNOX1P55347 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
PKNOX1P55347 AC003973.3-201ENST00000624863 2822 ntBASIC5.33□□□□□ -1.56
PKNOX1P55347 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.33□□□□□ -1.56
PKNOX1P55347 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
PKNOX1P55347 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.33□□□□□ -1.56
PKNOX1P55347 AC116158.1-201ENST00000560231 2129 ntBASIC5.33□□□□□ -1.56
PKNOX1P55347 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PKNOX1P55347 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
PKNOX1P55347 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.33□□□□□ -1.56
PKNOX1P55347 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PKNOX1P55347 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PKNOX1P55347 RN7SKP275-201ENST00000364626 301 ntBASIC5.33□□□□□ -1.56
PKNOX1P55347 GAPDHP42-201ENST00000406848 981 ntBASIC5.33□□□□□ -1.56
PKNOX1P55347 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.33□□□□□ -1.56
PKNOX1P55347 AC017019.1-201ENST00000426129 261 ntBASIC5.33□□□□□ -1.56
PKNOX1P55347 BX119321.1-201ENST00000428912 797 ntBASIC5.33□□□□□ -1.56
PKNOX1P55347 RPL12P18-201ENST00000437175 325 ntBASIC5.33□□□□□ -1.56
PKNOX1P55347 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
PKNOX1P55347 AP006222.1-205ENST00000450734 457 ntBASIC5.33□□□□□ -1.56
PKNOX1P55347 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.33□□□□□ -1.56
PKNOX1P55347 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.33□□□□□ -1.56
PKNOX1P55347 AC005165.2-201ENST00000466070 380 ntBASIC5.33□□□□□ -1.56
PKNOX1P55347 EIF3LP3-201ENST00000495197 822 ntBASIC5.33□□□□□ -1.56
PKNOX1P55347 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.33□□□□□ -1.56
PKNOX1P55347 SUMO2P4-201ENST00000504193 276 ntBASIC5.33□□□□□ -1.56
PKNOX1P55347 AC098976.1-201ENST00000513014 541 ntBASIC5.33□□□□□ -1.56
PKNOX1P55347 SCARNA20.4-201ENST00000516969 131 ntBASIC5.33□□□□□ -1.56
PKNOX1P55347 TRIM77BP-201ENST00000524985 1119 ntBASIC5.33□□□□□ -1.56
PKNOX1P55347 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.33□□□□□ -1.56
PKNOX1P55347 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC5.33□□□□□ -1.56
PKNOX1P55347 AC108738.1-201ENST00000603703 237 ntBASIC5.33□□□□□ -1.56
PKNOX1P55347 FAM72A-208ENST00000607379 1139 ntBASIC5.33□□□□□ -1.56
PKNOX1P55347 MIR7109-201ENST00000613748 65 ntBASIC5.33□□□□□ -1.56
PKNOX1P55347 MRRFP1-201ENST00000435941 1675 ntBASIC5.33□□□□□ -1.56
PKNOX1P55347 AL031595.2-201ENST00000624215 19071 ntBASIC5.33□□□□□ -1.56
PKNOX1P55347 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PKNOX1P55347 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PKNOX1P55347 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PKNOX1P55347 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
PKNOX1P55347 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PKNOX1P55347 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PKNOX1P55347 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PKNOX1P55347 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PKNOX1P55347 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PKNOX1P55347 IFIT1P1-201ENST00000400497 1449 ntBASIC5.32□□□□□ -1.56
PKNOX1P55347 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.32□□□□□ -1.56
PKNOX1P55347 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
PKNOX1P55347 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PKNOX1P55347 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PKNOX1P55347 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.32□□□□□ -1.56
PKNOX1P55347 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
PKNOX1P55347 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
PKNOX1P55347 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PKNOX1P55347 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.32□□□□□ -1.56
PKNOX1P55347 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms