Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC023141.8-201ENST00000442554 208 ntBASIC5.52□□□□□ -1.53
PDX1P52945 AL603882.1-201ENST00000463059 681 ntBASIC5.52□□□□□ -1.53
PDX1P52945 RN7SL610P-201ENST00000463845 291 ntBASIC5.52□□□□□ -1.53
PDX1P52945 AC093827.1-201ENST00000480094 861 ntBASIC5.52□□□□□ -1.53
PDX1P52945 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC5.52□□□□□ -1.53
PDX1P52945 OR5M14P-201ENST00000506803 618 ntBASIC5.52□□□□□ -1.53
PDX1P52945 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.52□□□□□ -1.53
PDX1P52945 RNA5SP92-201ENST00000516437 110 ntBASIC5.52□□□□□ -1.53
PDX1P52945 AC021678.3-201ENST00000517893 476 ntBASIC5.52□□□□□ -1.53
PDX1P52945 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC5.52□□□□□ -1.53
PDX1P52945 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.52□□□□□ -1.53
PDX1P52945 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.52□□□□□ -1.53
PDX1P52945 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.52□□□□□ -1.53
PDX1P52945 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.52□□□□□ -1.53
PDX1P52945 NPM1P42-201ENST00000560329 862 ntBASIC5.52□□□□□ -1.53
PDX1P52945 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PDX1P52945 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.52□□□□□ -1.53
PDX1P52945 AC023389.2-201ENST00000580031 955 ntBASIC5.52□□□□□ -1.53
PDX1P52945 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.52□□□□□ -1.53
PDX1P52945 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PDX1P52945 AP001267.4-201ENST00000602598 545 ntBASIC5.52□□□□□ -1.53
PDX1P52945 SUGT1P3-202ENST00000604259 383 ntBASIC5.52□□□□□ -1.53
PDX1P52945 OR7M1P-201ENST00000608946 533 ntBASIC5.52□□□□□ -1.53
PDX1P52945 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.52□□□□□ -1.53
PDX1P52945 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDX1P52945 AL355974.3-201ENST00000617383 467 ntBASIC5.52□□□□□ -1.53
PDX1P52945 AC005840.5-201ENST00000619166 599 ntBASIC5.52□□□□□ -1.53
PDX1P52945 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.52□□□□□ -1.53
PDX1P52945 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
PDX1P52945 AL139254.3-201ENST00000641097 674 ntBASIC5.52□□□□□ -1.53
PDX1P52945 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDX1P52945 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.52□□□□□ -1.53
PDX1P52945 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PDX1P52945 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDX1P52945 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.52□□□□□ -1.53
PDX1P52945 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
PDX1P52945 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDX1P52945 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.52□□□□□ -1.53
PDX1P52945 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDX1P52945 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PDX1P52945 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDX1P52945 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
PDX1P52945 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.52□□□□□ -1.53
PDX1P52945 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
PDX1P52945 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
PDX1P52945 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDX1P52945 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.51□□□□□ -1.53
PDX1P52945 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PDX1P52945 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PDX1P52945 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PDX1P52945 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
PDX1P52945 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PDX1P52945 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
PDX1P52945 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PDX1P52945 AL589826.1-201ENST00000340697 249 ntBASIC5.51□□□□□ -1.53
PDX1P52945 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PDX1P52945 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.51□□□□□ -1.53
PDX1P52945 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.51□□□□□ -1.53
PDX1P52945 AL133173.1-201ENST00000423458 397 ntBASIC5.51□□□□□ -1.53
PDX1P52945 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.51□□□□□ -1.53
PDX1P52945 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.51□□□□□ -1.53
PDX1P52945 MAPRE1P3-201ENST00000435438 796 ntBASIC5.51□□□□□ -1.53
PDX1P52945 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC5.51□□□□□ -1.53
PDX1P52945 AC089999.1-201ENST00000460336 374 ntBASIC5.51□□□□□ -1.53
PDX1P52945 RN7SL583P-201ENST00000475692 287 ntBASIC5.51□□□□□ -1.53
PDX1P52945 AC135999.1-201ENST00000478962 479 ntBASIC5.51□□□□□ -1.53
PDX1P52945 AC004815.1-201ENST00000484185 331 ntBASIC5.51□□□□□ -1.53
PDX1P52945 EIF1P7-201ENST00000487533 337 ntBASIC5.51□□□□□ -1.53
PDX1P52945 AC073610.1-201ENST00000489971 396 ntBASIC5.51□□□□□ -1.53
PDX1P52945 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PDX1P52945 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.51□□□□□ -1.53
PDX1P52945 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.51□□□□□ -1.53
PDX1P52945 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.51□□□□□ -1.53
PDX1P52945 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.51□□□□□ -1.53
PDX1P52945 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.51□□□□□ -1.53
PDX1P52945 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.51□□□□□ -1.53
PDX1P52945 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
PDX1P52945 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.51□□□□□ -1.53
PDX1P52945 AC009268.1-201ENST00000561352 1203 ntBASIC5.51□□□□□ -1.53
PDX1P52945 AC015720.2-201ENST00000567709 334 ntBASIC5.51□□□□□ -1.53
PDX1P52945 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.51□□□□□ -1.53
PDX1P52945 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
PDX1P52945 AC010245.2-201ENST00000606908 1167 ntBASIC5.51□□□□□ -1.53
PDX1P52945 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.51□□□□□ -1.53
PDX1P52945 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.51□□□□□ -1.53
PDX1P52945 AL390318.1-201ENST00000624564 687 ntBASIC5.51□□□□□ -1.53
PDX1P52945 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.51□□□□□ -1.53
PDX1P52945 SAMMSON-227ENST00000642114 1199 ntBASIC5.51□□□□□ -1.53
PDX1P52945 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PDX1P52945 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PDX1P52945 AC092070.2-203ENST00000598377 3644 ntBASIC5.51□□□□□ -1.53
PDX1P52945 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
PDX1P52945 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PDX1P52945 MFSD8-219ENST00000641228 2559 ntBASIC5.51□□□□□ -1.53
PDX1P52945 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
PDX1P52945 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PDX1P52945 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
PDX1P52945 AC117409.1-201ENST00000470499 1310 ntBASIC5.5□□□□□ -1.53
PDX1P52945 AC022417.1-201ENST00000624768 1303 ntBASIC5.5□□□□□ -1.53
PDX1P52945 SAMMSON-210ENST00000641260 1308 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms