Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC7.39□□□□□ -1.23
USP11P51784 SMARCE1P1-201ENST00000417747 1186 ntBASIC7.39□□□□□ -1.23
USP11P51784 RPL36P18-201ENST00000419316 318 ntBASIC7.39□□□□□ -1.23
USP11P51784 AC246680.2-201ENST00000422106 389 ntBASIC7.39□□□□□ -1.23
USP11P51784 AL139184.1-202ENST00000422303 222 ntBASIC7.39□□□□□ -1.23
USP11P51784 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC7.39□□□□□ -1.23
USP11P51784 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC7.39□□□□□ -1.23
USP11P51784 AC244035.1-201ENST00000430042 390 ntBASIC7.39□□□□□ -1.23
USP11P51784 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC7.39□□□□□ -1.23
USP11P51784 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC7.39□□□□□ -1.23
USP11P51784 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC7.39□□□□□ -1.23
USP11P51784 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC7.39□□□□□ -1.23
USP11P51784 ARL5AP3-201ENST00000439327 386 ntBASIC7.39□□□□□ -1.23
USP11P51784 GTF2IP14-201ENST00000441415 586 ntBASIC7.39□□□□□ -1.23
USP11P51784 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
USP11P51784 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC7.39□□□□□ -1.23
USP11P51784 PPIA-203ENST00000451562 544 ntTSL 2 BASIC7.39□□□□□ -1.23
USP11P51784 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC7.39□□□□□ -1.23
USP11P51784 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC7.39□□□□□ -1.23
USP11P51784 RPS7P10-201ENST00000464254 603 ntBASIC7.39□□□□□ -1.23
USP11P51784 AC092824.1-201ENST00000483524 576 ntBASIC7.39□□□□□ -1.23
USP11P51784 AC011825.1-201ENST00000484967 388 ntBASIC7.39□□□□□ -1.23
USP11P51784 AC093890.1-201ENST00000502554 540 ntBASIC7.39□□□□□ -1.23
USP11P51784 AC093770.1-201ENST00000511559 571 ntBASIC7.39□□□□□ -1.23
USP11P51784 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC7.39□□□□□ -1.23
USP11P51784 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC7.39□□□□□ -1.23
USP11P51784 AL133399.1-201ENST00000527476 298 ntBASIC7.39□□□□□ -1.23
USP11P51784 OR4A6P-201ENST00000534364 970 ntBASIC7.39□□□□□ -1.23
USP11P51784 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC7.39□□□□□ -1.23
USP11P51784 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
USP11P51784 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC7.39□□□□□ -1.23
USP11P51784 AC023968.1-201ENST00000560719 475 ntBASIC7.39□□□□□ -1.23
USP11P51784 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC7.39□□□□□ -1.23
USP11P51784 AC090695.1-201ENST00000561269 1222 ntBASIC7.39□□□□□ -1.23
USP11P51784 AC027104.1-201ENST00000563702 681 ntBASIC7.39□□□□□ -1.23
USP11P51784 MIR3915-201ENST00000578518 97 ntBASIC7.39□□□□□ -1.23
USP11P51784 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC7.39□□□□□ -1.23
USP11P51784 AL020997.3-201ENST00000602843 359 ntBASIC7.39□□□□□ -1.23
USP11P51784 AC108747.1-201ENST00000609508 535 ntBASIC7.39□□□□□ -1.23
USP11P51784 AL359513.1-201ENST00000614364 557 ntBASIC7.39□□□□□ -1.23
USP11P51784 OR11H2-202ENST00000641517 1085 ntBASIC7.39□□□□□ -1.23
USP11P51784 AL121936.2-201ENST00000641935 662 ntBASIC7.39□□□□□ -1.23
USP11P51784 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC7.39□□□□□ -1.23
USP11P51784 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC7.39□□□□□ -1.23
USP11P51784 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
USP11P51784 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
USP11P51784 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
USP11P51784 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
USP11P51784 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
USP11P51784 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC7.39□□□□□ -1.23
USP11P51784 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
USP11P51784 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
USP11P51784 AL117339.4-201ENST00000608335 7063 ntBASIC7.39□□□□□ -1.23
USP11P51784 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
USP11P51784 AL021877.2-201ENST00000624442 10684 ntBASIC7.38□□□□□ -1.23
USP11P51784 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC7.38□□□□□ -1.23
USP11P51784 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
USP11P51784 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
USP11P51784 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
USP11P51784 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
USP11P51784 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC7.38□□□□□ -1.23
USP11P51784 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
USP11P51784 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
USP11P51784 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
USP11P51784 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC7.38□□□□□ -1.23
USP11P51784 TINAG-202ENST00000370864 692 ntTSL 2 BASIC7.38□□□□□ -1.23
USP11P51784 TRAV35-201ENST00000390462 330 ntBASIC7.38□□□□□ -1.23
USP11P51784 RN7SKP146-201ENST00000410242 334 ntBASIC7.38□□□□□ -1.23
USP11P51784 OR8G2P-201ENST00000412796 908 ntBASIC7.38□□□□□ -1.23
USP11P51784 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
USP11P51784 GLUD1P9-201ENST00000420997 1173 ntBASIC7.38□□□□□ -1.23
USP11P51784 TNPO1P1-201ENST00000423641 1138 ntBASIC7.38□□□□□ -1.23
USP11P51784 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC7.38□□□□□ -1.23
USP11P51784 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC7.38□□□□□ -1.23
USP11P51784 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC7.38□□□□□ -1.23
USP11P51784 BX119904.1-201ENST00000432026 348 ntBASIC7.38□□□□□ -1.23
USP11P51784 AL365220.1-201ENST00000432923 399 ntBASIC7.38□□□□□ -1.23
USP11P51784 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC7.38□□□□□ -1.23
USP11P51784 MTCO1P52-201ENST00000433928 531 ntBASIC7.38□□□□□ -1.23
USP11P51784 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC7.38□□□□□ -1.23
USP11P51784 RPL6P5-201ENST00000445678 828 ntBASIC7.38□□□□□ -1.23
USP11P51784 Z95152.1-201ENST00000453556 656 ntBASIC7.38□□□□□ -1.23
USP11P51784 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC7.38□□□□□ -1.23
USP11P51784 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC7.38□□□□□ -1.23
USP11P51784 AC117394.1-201ENST00000477323 567 ntBASIC7.38□□□□□ -1.23
USP11P51784 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC7.38□□□□□ -1.23
USP11P51784 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC7.38□□□□□ -1.23
USP11P51784 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC7.38□□□□□ -1.23
USP11P51784 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC7.38□□□□□ -1.23
USP11P51784 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC7.38□□□□□ -1.23
USP11P51784 OR8G3P-201ENST00000533406 921 ntBASIC7.38□□□□□ -1.23
USP11P51784 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC7.38□□□□□ -1.23
USP11P51784 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
USP11P51784 AC087481.2-201ENST00000565492 330 ntBASIC7.38□□□□□ -1.23
USP11P51784 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC7.38□□□□□ -1.23
USP11P51784 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC7.38□□□□□ -1.23
USP11P51784 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC7.38□□□□□ -1.23
USP11P51784 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC7.38□□□□□ -1.23
USP11P51784 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC7.38□□□□□ -1.23
USP11P51784 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms