Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SLC1A1P43005 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
SLC1A1P43005 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
SLC1A1P43005 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SLC1A1P43005 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SLC1A1P43005 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SLC1A1P43005 AC092376.2-201ENST00000622621 4116 ntBASIC5.71□□□□□ -1.5
SLC1A1P43005 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SLC1A1P43005 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SLC1A1P43005 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SLC1A1P43005 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.7□□□□□ -1.5
SLC1A1P43005 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.7□□□□□ -1.5
SLC1A1P43005 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
SLC1A1P43005 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SLC1A1P43005 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SLC1A1P43005 RNU4-2-201ENST00000365668 141 ntBASIC5.7□□□□□ -1.5
SLC1A1P43005 OR1L6-202ENST00000373684 1044 ntBASIC5.7□□□□□ -1.5
SLC1A1P43005 DBIP1-201ENST00000401435 260 ntBASIC5.7□□□□□ -1.5
SLC1A1P43005 GNG5P5-201ENST00000420444 220 ntBASIC5.7□□□□□ -1.5
SLC1A1P43005 AC093155.2-201ENST00000420734 937 ntBASIC5.7□□□□□ -1.5
SLC1A1P43005 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.7□□□□□ -1.5
SLC1A1P43005 RPL34P3-201ENST00000421454 338 ntBASIC5.7□□□□□ -1.5
SLC1A1P43005 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.7□□□□□ -1.5
SLC1A1P43005 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.7□□□□□ -1.5
SLC1A1P43005 Z84478.1-201ENST00000438230 1219 ntBASIC5.7□□□□□ -1.5
SLC1A1P43005 OR52E3P-201ENST00000452083 936 ntBASIC5.7□□□□□ -1.5
SLC1A1P43005 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.7□□□□□ -1.5
SLC1A1P43005 RPS12P31-201ENST00000491419 398 ntBASIC5.7□□□□□ -1.5
SLC1A1P43005 RPL37P23-201ENST00000492641 294 ntBASIC5.7□□□□□ -1.5
SLC1A1P43005 RN7SL649P-201ENST00000496974 275 ntBASIC5.7□□□□□ -1.5
SLC1A1P43005 IMPA1P1-201ENST00000510718 842 ntBASIC5.7□□□□□ -1.5
SLC1A1P43005 MTND6P2-201ENST00000512226 524 ntBASIC5.7□□□□□ -1.5
SLC1A1P43005 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.7□□□□□ -1.5
SLC1A1P43005 CYCSP22-201ENST00000517555 339 ntBASIC5.7□□□□□ -1.5
SLC1A1P43005 FTH1P11-201ENST00000517577 551 ntBASIC5.7□□□□□ -1.5
SLC1A1P43005 AC092709.1-201ENST00000521355 1045 ntBASIC5.7□□□□□ -1.5
SLC1A1P43005 OR8G3P-201ENST00000533406 921 ntBASIC5.7□□□□□ -1.5
SLC1A1P43005 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SLC1A1P43005 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.7□□□□□ -1.5
SLC1A1P43005 AC107958.1-201ENST00000556576 290 ntBASIC5.7□□□□□ -1.5
SLC1A1P43005 RBM22P12-201ENST00000567098 1255 ntBASIC5.7□□□□□ -1.5
SLC1A1P43005 OOSP1P2-201ENST00000579644 351 ntBASIC5.7□□□□□ -1.5
SLC1A1P43005 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.7□□□□□ -1.5
SLC1A1P43005 AC092944.2-201ENST00000605443 889 ntBASIC5.7□□□□□ -1.5
SLC1A1P43005 Z95327.3-201ENST00000610385 572 ntBASIC5.7□□□□□ -1.5
SLC1A1P43005 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.7□□□□□ -1.5
SLC1A1P43005 AC026367.3-201ENST00000619032 590 ntBASIC5.7□□□□□ -1.5
SLC1A1P43005 AC241377.1-201ENST00000619797 406 ntBASIC5.7□□□□□ -1.5
SLC1A1P43005 AC138965.3-201ENST00000623875 498 ntBASIC5.7□□□□□ -1.5
SLC1A1P43005 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SLC1A1P43005 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
SLC1A1P43005 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
SLC1A1P43005 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SLC1A1P43005 SSXP3-201ENST00000442971 1300 ntBASIC5.7□□□□□ -1.5
SLC1A1P43005 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SLC1A1P43005 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SLC1A1P43005 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SLC1A1P43005 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SLC1A1P43005 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SLC1A1P43005 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
SLC1A1P43005 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SLC1A1P43005 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
SLC1A1P43005 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.69□□□□□ -1.5
SLC1A1P43005 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SLC1A1P43005 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.69□□□□□ -1.5
SLC1A1P43005 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SLC1A1P43005 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SLC1A1P43005 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.69□□□□□ -1.5
SLC1A1P43005 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.69□□□□□ -1.5
SLC1A1P43005 EEF1B2P8-201ENST00000414101 671 ntBASIC5.69□□□□□ -1.5
SLC1A1P43005 AL662874.1-201ENST00000426065 230 ntBASIC5.69□□□□□ -1.5
SLC1A1P43005 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.69□□□□□ -1.5
SLC1A1P43005 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.69□□□□□ -1.5
SLC1A1P43005 AL672138.1-201ENST00000450604 1015 ntBASIC5.69□□□□□ -1.5
SLC1A1P43005 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SLC1A1P43005 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SLC1A1P43005 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SLC1A1P43005 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SLC1A1P43005 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.69□□□□□ -1.5
SLC1A1P43005 RNA5SP230-201ENST00000517039 122 ntBASIC5.69□□□□□ -1.5
SLC1A1P43005 AC138832.1-201ENST00000522871 556 ntBASIC5.69□□□□□ -1.5
SLC1A1P43005 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC5.69□□□□□ -1.5
SLC1A1P43005 AC130364.2-201ENST00000528639 604 ntBASIC5.69□□□□□ -1.5
SLC1A1P43005 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.69□□□□□ -1.5
SLC1A1P43005 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.69□□□□□ -1.5
SLC1A1P43005 RN7SL356P-201ENST00000582228 248 ntBASIC5.69□□□□□ -1.5
SLC1A1P43005 AC010503.3-201ENST00000594355 540 ntBASIC5.69□□□□□ -1.5
SLC1A1P43005 AP000769.2-201ENST00000602344 396 ntBASIC5.69□□□□□ -1.5
SLC1A1P43005 AP005431.1-201ENST00000618479 319 ntBASIC5.69□□□□□ -1.5
SLC1A1P43005 AC007683.2-201ENST00000624681 714 ntBASIC5.69□□□□□ -1.5
SLC1A1P43005 AP003400.3-201ENST00000624904 346 ntBASIC5.69□□□□□ -1.5
SLC1A1P43005 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.69□□□□□ -1.5
SLC1A1P43005 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SLC1A1P43005 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SLC1A1P43005 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
SLC1A1P43005 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
SLC1A1P43005 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SLC1A1P43005 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SLC1A1P43005 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SLC1A1P43005 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms