Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 CNN3P1-201ENST00000401596 935 ntBASIC6.28□□□□□ -1.4
HOXC12P31275 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HOXC12P31275 RN7SKP148-201ENST00000410179 275 ntBASIC6.28□□□□□ -1.4
HOXC12P31275 CEACAMP8-201ENST00000413902 580 ntBASIC6.28□□□□□ -1.4
HOXC12P31275 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC6.28□□□□□ -1.4
HOXC12P31275 VDAC1P10-201ENST00000416715 891 ntBASIC6.28□□□□□ -1.4
HOXC12P31275 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC6.28□□□□□ -1.4
HOXC12P31275 AL022400.1-201ENST00000423946 935 ntBASIC6.28□□□□□ -1.4
HOXC12P31275 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC6.28□□□□□ -1.4
HOXC12P31275 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC6.28□□□□□ -1.4
HOXC12P31275 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HOXC12P31275 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC6.28□□□□□ -1.4
HOXC12P31275 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HOXC12P31275 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.28□□□□□ -1.4
HOXC12P31275 BX323845.2-201ENST00000458382 234 ntBASIC6.28□□□□□ -1.4
HOXC12P31275 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HOXC12P31275 RPL7P1-201ENST00000468161 747 ntBASIC6.28□□□□□ -1.4
HOXC12P31275 RPL7P9-201ENST00000468715 747 ntBASIC6.28□□□□□ -1.4
HOXC12P31275 RN7SL392P-201ENST00000473024 299 ntBASIC6.28□□□□□ -1.4
HOXC12P31275 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC6.28□□□□□ -1.4
HOXC12P31275 AC073522.1-201ENST00000483312 377 ntBASIC6.28□□□□□ -1.4
HOXC12P31275 PRICKLE2-AS2-201ENST00000484703 496 ntTSL 3 BASIC6.28□□□□□ -1.4
HOXC12P31275 AC117395.1-201ENST00000487390 403 ntBASIC6.28□□□□□ -1.4
HOXC12P31275 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.28□□□□□ -1.4
HOXC12P31275 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HOXC12P31275 AC079395.1-201ENST00000510981 262 ntBASIC6.28□□□□□ -1.4
HOXC12P31275 AC011352.1-201ENST00000512300 793 ntBASIC6.28□□□□□ -1.4
HOXC12P31275 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC6.28□□□□□ -1.4
HOXC12P31275 RNU6-678P-201ENST00000516832 109 ntBASIC6.28□□□□□ -1.4
HOXC12P31275 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.28□□□□□ -1.4
HOXC12P31275 AC084337.1-201ENST00000524809 686 ntBASIC6.28□□□□□ -1.4
HOXC12P31275 HIGD1AP10-201ENST00000527837 282 ntBASIC6.28□□□□□ -1.4
HOXC12P31275 AP001317.1-201ENST00000531194 960 ntBASIC6.28□□□□□ -1.4
HOXC12P31275 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC6.28□□□□□ -1.4
HOXC12P31275 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC6.28□□□□□ -1.4
HOXC12P31275 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HOXC12P31275 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC6.28□□□□□ -1.4
HOXC12P31275 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.28□□□□□ -1.4
HOXC12P31275 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC6.28□□□□□ -1.4
HOXC12P31275 AGGF1P7-201ENST00000562369 913 ntBASIC6.28□□□□□ -1.4
HOXC12P31275 EEF1B2P1-201ENST00000567221 672 ntBASIC6.28□□□□□ -1.4
HOXC12P31275 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC6.28□□□□□ -1.4
HOXC12P31275 MIR3135A-201ENST00000578460 77 ntBASIC6.28□□□□□ -1.4
HOXC12P31275 ZNF415P1-201ENST00000582279 1166 ntBASIC6.28□□□□□ -1.4
HOXC12P31275 MIR548Y-201ENST00000582739 110 ntBASIC6.28□□□□□ -1.4
HOXC12P31275 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.28□□□□□ -1.4
HOXC12P31275 AC009220.3-201ENST00000604318 586 ntBASIC6.28□□□□□ -1.4
HOXC12P31275 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC6.28□□□□□ -1.4
HOXC12P31275 AC069545.1-201ENST00000605671 358 ntBASIC6.28□□□□□ -1.4
HOXC12P31275 AL021997.1-201ENST00000605757 193 ntBASIC6.28□□□□□ -1.4
HOXC12P31275 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC6.28□□□□□ -1.4
HOXC12P31275 AC122710.3-201ENST00000606566 541 ntBASIC6.28□□□□□ -1.4
HOXC12P31275 AC131235.4-201ENST00000609288 620 ntBASIC6.28□□□□□ -1.4
HOXC12P31275 AC007204.2-201ENST00000615022 616 ntBASIC6.28□□□□□ -1.4
HOXC12P31275 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC6.28□□□□□ -1.4
HOXC12P31275 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HOXC12P31275 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HOXC12P31275 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
HOXC12P31275 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
HOXC12P31275 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
HOXC12P31275 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HOXC12P31275 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
HOXC12P31275 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
HOXC12P31275 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC6.28□□□□□ -1.4
HOXC12P31275 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HOXC12P31275 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HOXC12P31275 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.4
HOXC12P31275 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HOXC12P31275 MTND4P31-201ENST00000425607 1343 ntBASIC6.27□□□□□ -1.41
HOXC12P31275 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.27□□□□□ -1.41
HOXC12P31275 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.27□□□□□ -1.41
HOXC12P31275 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HOXC12P31275 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
HOXC12P31275 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
HOXC12P31275 AC005614.1-201ENST00000598952 3653 ntBASIC6.27□□□□□ -1.41
HOXC12P31275 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
HOXC12P31275 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC6.27□□□□□ -1.41
HOXC12P31275 AC073429.2-201ENST00000569694 1444 ntBASIC6.27□□□□□ -1.41
HOXC12P31275 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
HOXC12P31275 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HOXC12P31275 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HOXC12P31275 AC004988.1-201ENST00000415237 1771 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HOXC12P31275 MTND5P24-201ENST00000438892 1767 ntBASIC6.27□□□□□ -1.41
HOXC12P31275 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HOXC12P31275 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC6.27□□□□□ -1.41
HOXC12P31275 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HOXC12P31275 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HOXC12P31275 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HOXC12P31275 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC6.27□□□□□ -1.41
HOXC12P31275 RNA5SP114-201ENST00000363780 113 ntBASIC6.27□□□□□ -1.41
HOXC12P31275 RNU6-931P-201ENST00000363850 107 ntBASIC6.27□□□□□ -1.41
HOXC12P31275 RNA5SP472-201ENST00000363868 119 ntBASIC6.27□□□□□ -1.41
HOXC12P31275 RN7SKP55-201ENST00000364888 307 ntBASIC6.27□□□□□ -1.41
HOXC12P31275 Y_RNA.553-201ENST00000384670 102 ntBASIC6.27□□□□□ -1.41
HOXC12P31275 MIR152-201ENST00000385212 87 ntBASIC6.27□□□□□ -1.41
HOXC12P31275 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
HOXC12P31275 RNA5SP53-201ENST00000391299 120 ntBASIC6.27□□□□□ -1.41
HOXC12P31275 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
HOXC12P31275 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HOXC12P31275 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms