Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC8.53□□□□□ -1.04
CLIP1P30622 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC8.53□□□□□ -1.04
CLIP1P30622 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
CLIP1P30622 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
CLIP1P30622 RN7SKP115-201ENST00000363177 317 ntBASIC8.53□□□□□ -1.04
CLIP1P30622 RBMY2KP-201ENST00000418221 992 ntBASIC8.53□□□□□ -1.04
CLIP1P30622 NDUFB4P8-201ENST00000435351 367 ntBASIC8.53□□□□□ -1.04
CLIP1P30622 SNRPCP2-201ENST00000504370 475 ntBASIC8.53□□□□□ -1.04
CLIP1P30622 OR8Q1P-201ENST00000526467 655 ntBASIC8.53□□□□□ -1.04
CLIP1P30622 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC8.53□□□□□ -1.04
CLIP1P30622 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC8.53□□□□□ -1.04
CLIP1P30622 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC8.53□□□□□ -1.04
CLIP1P30622 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC8.53□□□□□ -1.04
CLIP1P30622 AC004076.2-201ENST00000620532 3323 ntBASIC8.53□□□□□ -1.04
CLIP1P30622 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CLIP1P30622 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CLIP1P30622 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC8.53□□□□□ -1.04
CLIP1P30622 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
CLIP1P30622 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.04
CLIP1P30622 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
CLIP1P30622 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC8.52□□□□□ -1.04
CLIP1P30622 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.04
CLIP1P30622 EPS15P1-202ENST00000459691 2071 ntBASIC8.52□□□□□ -1.05
CLIP1P30622 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
CLIP1P30622 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CLIP1P30622 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
CLIP1P30622 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
CLIP1P30622 Y_RNA.625-201ENST00000411256 107 ntBASIC8.52□□□□□ -1.05
CLIP1P30622 AC093655.2-201ENST00000425735 631 ntBASIC8.52□□□□□ -1.05
CLIP1P30622 RN7SKP66-201ENST00000516681 231 ntBASIC8.52□□□□□ -1.05
CLIP1P30622 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC8.52□□□□□ -1.05
CLIP1P30622 AC013701.1-201ENST00000522657 465 ntBASIC8.52□□□□□ -1.05
CLIP1P30622 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC8.52□□□□□ -1.05
CLIP1P30622 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC8.52□□□□□ -1.05
CLIP1P30622 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC8.52□□□□□ -1.05
CLIP1P30622 OR1F2P-201ENST00000570470 933 ntBASIC8.52□□□□□ -1.05
CLIP1P30622 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC8.52□□□□□ -1.05
CLIP1P30622 AC025857.2-201ENST00000602711 238 ntBASIC8.52□□□□□ -1.05
CLIP1P30622 AC133644.2-201ENST00000608142 540 ntBASIC8.52□□□□□ -1.05
CLIP1P30622 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC8.52□□□□□ -1.05
CLIP1P30622 AP002799.1-201ENST00000623552 423 ntBASIC8.52□□□□□ -1.05
CLIP1P30622 AC005618.4-201ENST00000625053 554 ntBASIC8.52□□□□□ -1.05
CLIP1P30622 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CLIP1P30622 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC8.52□□□□□ -1.05
CLIP1P30622 AC015799.1-201ENST00000622996 3122 ntBASIC8.52□□□□□ -1.05
CLIP1P30622 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
CLIP1P30622 AC003973.3-201ENST00000624863 2822 ntBASIC8.52□□□□□ -1.05
CLIP1P30622 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
CLIP1P30622 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CLIP1P30622 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CLIP1P30622 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
CLIP1P30622 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC8.51□□□□□ -1.05
CLIP1P30622 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CLIP1P30622 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CLIP1P30622 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CLIP1P30622 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC8.51□□□□□ -1.05
CLIP1P30622 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
CLIP1P30622 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC8.51□□□□□ -1.05
CLIP1P30622 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CLIP1P30622 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
CLIP1P30622 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC8.51□□□□□ -1.05
CLIP1P30622 SNORA17.1-201ENST00000362945 126 ntBASIC8.51□□□□□ -1.05
CLIP1P30622 RNU1-43P-201ENST00000365052 165 ntBASIC8.51□□□□□ -1.05
CLIP1P30622 AC110775.1-201ENST00000513721 462 ntBASIC8.51□□□□□ -1.05
CLIP1P30622 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC8.51□□□□□ -1.05
CLIP1P30622 AL390726.5-202ENST00000564800 256 ntBASIC8.51□□□□□ -1.05
CLIP1P30622 AC008814.1-201ENST00000603797 406 ntBASIC8.51□□□□□ -1.05
CLIP1P30622 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC8.51□□□□□ -1.05
CLIP1P30622 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC8.51□□□□□ -1.05
CLIP1P30622 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
CLIP1P30622 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
CLIP1P30622 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC8.51□□□□□ -1.05
CLIP1P30622 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
CLIP1P30622 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC8.51□□□□□ -1.05
CLIP1P30622 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC8.5□□□□□ -1.05
CLIP1P30622 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
CLIP1P30622 AC114947.2-201ENST00000565748 2125 ntBASIC8.5□□□□□ -1.05
CLIP1P30622 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
CLIP1P30622 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CLIP1P30622 U3.3-201ENST00000362986 216 ntBASIC8.5□□□□□ -1.05
CLIP1P30622 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CLIP1P30622 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CLIP1P30622 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
CLIP1P30622 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CLIP1P30622 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC8.5□□□□□ -1.05
CLIP1P30622 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC8.5□□□□□ -1.05
CLIP1P30622 Z92846.1-201ENST00000456203 268 ntBASIC8.5□□□□□ -1.05
CLIP1P30622 RN7SL860P-201ENST00000473738 223 ntBASIC8.5□□□□□ -1.05
CLIP1P30622 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CLIP1P30622 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC8.5□□□□□ -1.05
CLIP1P30622 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC8.5□□□□□ -1.05
CLIP1P30622 AP001922.4-201ENST00000526967 290 ntBASIC8.5□□□□□ -1.05
CLIP1P30622 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC8.5□□□□□ -1.05
CLIP1P30622 MIR6820-201ENST00000611508 62 ntBASIC8.5□□□□□ -1.05
CLIP1P30622 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
CLIP1P30622 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CLIP1P30622 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
CLIP1P30622 PANDAR-201ENST00000629595 1506 ntBASIC8.5□□□□□ -1.05
CLIP1P30622 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CLIP1P30622 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms