Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.58□□□□□ -1.52
TNFSF4P23510 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TNFSF4P23510 MAPK10-344ENST00000641718 3746 ntBASIC5.58□□□□□ -1.52
TNFSF4P23510 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
TNFSF4P23510 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TNFSF4P23510 FANCD2P2-201ENST00000437591 1400 ntBASIC5.57□□□□□ -1.52
TNFSF4P23510 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
TNFSF4P23510 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
TNFSF4P23510 AC026523.2-201ENST00000625039 7739 ntBASIC5.57□□□□□ -1.52
TNFSF4P23510 AC005618.1-201ENST00000606901 3148 ntBASIC5.57□□□□□ -1.52
TNFSF4P23510 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TNFSF4P23510 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
TNFSF4P23510 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TNFSF4P23510 AC062022.1-201ENST00000451026 1684 ntBASIC5.57□□□□□ -1.52
TNFSF4P23510 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TNFSF4P23510 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TNFSF4P23510 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC5.57□□□□□ -1.52
TNFSF4P23510 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
TNFSF4P23510 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
TNFSF4P23510 OR2M1P-201ENST00000318104 951 ntBASIC5.57□□□□□ -1.52
TNFSF4P23510 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
TNFSF4P23510 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TNFSF4P23510 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TNFSF4P23510 GGA1-205ENST00000405147 575 ntTSL 4 BASIC5.57□□□□□ -1.52
TNFSF4P23510 SNORA11C-201ENST00000408532 129 ntBASIC5.57□□□□□ -1.52
TNFSF4P23510 UBTFL2-201ENST00000411859 1191 ntBASIC5.57□□□□□ -1.52
TNFSF4P23510 TRIM60P5Y-201ENST00000413946 574 ntBASIC5.57□□□□□ -1.52
TNFSF4P23510 BTF3P8-201ENST00000414577 526 ntBASIC5.57□□□□□ -1.52
TNFSF4P23510 AL449283.1-202ENST00000418249 604 ntBASIC5.57□□□□□ -1.52
TNFSF4P23510 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC5.57□□□□□ -1.52
TNFSF4P23510 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC5.57□□□□□ -1.52
TNFSF4P23510 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TNFSF4P23510 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.57□□□□□ -1.52
TNFSF4P23510 COL11A2P1-205ENST00000441798 676 ntBASIC5.57□□□□□ -1.52
TNFSF4P23510 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.57□□□□□ -1.52
TNFSF4P23510 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
TNFSF4P23510 DNAJC19P8-201ENST00000452887 259 ntBASIC5.57□□□□□ -1.52
TNFSF4P23510 RBMY2HP-201ENST00000457961 720 ntBASIC5.57□□□□□ -1.52
TNFSF4P23510 RPL7AP10-201ENST00000481016 791 ntBASIC5.57□□□□□ -1.52
TNFSF4P23510 SNORA58-201ENST00000505219 137 ntBASIC5.57□□□□□ -1.52
TNFSF4P23510 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC5.57□□□□□ -1.52
TNFSF4P23510 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.57□□□□□ -1.52
TNFSF4P23510 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC5.57□□□□□ -1.52
TNFSF4P23510 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC5.57□□□□□ -1.52
TNFSF4P23510 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.57□□□□□ -1.52
TNFSF4P23510 OR8A2P-201ENST00000528631 952 ntBASIC5.57□□□□□ -1.52
TNFSF4P23510 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.57□□□□□ -1.52
TNFSF4P23510 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC5.57□□□□□ -1.52
TNFSF4P23510 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC5.57□□□□□ -1.52
TNFSF4P23510 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC5.57□□□□□ -1.52
TNFSF4P23510 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC5.57□□□□□ -1.52
TNFSF4P23510 RBM22P1-201ENST00000578589 1214 ntBASIC5.57□□□□□ -1.52
TNFSF4P23510 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC5.57□□□□□ -1.52
TNFSF4P23510 VN1R88P-201ENST00000596787 292 ntBASIC5.57□□□□□ -1.52
TNFSF4P23510 AC245052.7-201ENST00000601161 359 ntBASIC5.57□□□□□ -1.52
TNFSF4P23510 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC5.57□□□□□ -1.52
TNFSF4P23510 AL365400.2-201ENST00000605604 902 ntBASIC5.57□□□□□ -1.52
TNFSF4P23510 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
TNFSF4P23510 MIR6885-201ENST00000612241 66 ntBASIC5.57□□□□□ -1.52
TNFSF4P23510 VN1R74P-201ENST00000613259 503 ntBASIC5.57□□□□□ -1.52
TNFSF4P23510 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC5.57□□□□□ -1.52
TNFSF4P23510 AC244100.4-201ENST00000617747 388 ntBASIC5.57□□□□□ -1.52
TNFSF4P23510 AL132640.3-201ENST00000630473 177 ntBASIC5.57□□□□□ -1.52
TNFSF4P23510 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
TNFSF4P23510 AC046144.1-201ENST00000478559 1853 ntBASIC5.57□□□□□ -1.52
TNFSF4P23510 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.57□□□□□ -1.52
TNFSF4P23510 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.57□□□□□ -1.52
TNFSF4P23510 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TNFSF4P23510 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
TNFSF4P23510 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TNFSF4P23510 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC5.57□□□□□ -1.52
TNFSF4P23510 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC5.57□□□□□ -1.52
TNFSF4P23510 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TNFSF4P23510 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
TNFSF4P23510 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.57□□□□□ -1.52
TNFSF4P23510 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
TNFSF4P23510 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
TNFSF4P23510 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TNFSF4P23510 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TNFSF4P23510 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
TNFSF4P23510 AC105114.1-201ENST00000624795 1862 ntBASIC5.56□□□□□ -1.52
TNFSF4P23510 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TNFSF4P23510 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TNFSF4P23510 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.56□□□□□ -1.52
TNFSF4P23510 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TNFSF4P23510 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TNFSF4P23510 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TNFSF4P23510 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TNFSF4P23510 RNU1-146P-201ENST00000364015 165 ntBASIC5.56□□□□□ -1.52
TNFSF4P23510 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC5.56□□□□□ -1.52
TNFSF4P23510 AL451142.1-201ENST00000375867 775 ntBASIC5.56□□□□□ -1.52
TNFSF4P23510 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TNFSF4P23510 RNU1-74P-201ENST00000384108 171 ntBASIC5.56□□□□□ -1.52
TNFSF4P23510 MIR191-201ENST00000384873 92 ntBASIC5.56□□□□□ -1.52
TNFSF4P23510 AL050335.1-201ENST00000396909 869 ntBASIC5.56□□□□□ -1.52
TNFSF4P23510 MTCO1P56-201ENST00000401674 224 ntBASIC5.56□□□□□ -1.52
TNFSF4P23510 RN7SKP221-201ENST00000410420 301 ntBASIC5.56□□□□□ -1.52
TNFSF4P23510 NPM1P40-201ENST00000412758 733 ntBASIC5.56□□□□□ -1.52
TNFSF4P23510 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.56□□□□□ -1.52
TNFSF4P23510 AC113412.1-201ENST00000425840 504 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms