Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 TRIM51GP-201ENST00000534741 1350 ntBASIC4.65□□□□□ -1.66
CCL1P22362 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CCL1P22362 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CCL1P22362 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CCL1P22362 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CCL1P22362 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CCL1P22362 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.65□□□□□ -1.66
CCL1P22362 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
CCL1P22362 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.66
CCL1P22362 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CCL1P22362 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CCL1P22362 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CCL1P22362 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.65□□□□□ -1.66
CCL1P22362 OR9K1P-201ENST00000326513 941 ntBASIC4.65□□□□□ -1.67
CCL1P22362 AC023490.2-201ENST00000359859 470 ntBASIC4.65□□□□□ -1.67
CCL1P22362 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CCL1P22362 PPCS-201ENST00000372556 984 ntTSL 2 BASIC4.65□□□□□ -1.67
CCL1P22362 RN7SKP240-201ENST00000410583 375 ntBASIC4.65□□□□□ -1.67
CCL1P22362 RPL12P9-201ENST00000412942 488 ntBASIC4.65□□□□□ -1.67
CCL1P22362 EEF1B2P8-201ENST00000414101 671 ntBASIC4.65□□□□□ -1.67
CCL1P22362 XIST-201ENST00000416330 750 ntTSL 2 BASIC4.65□□□□□ -1.67
CCL1P22362 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.65□□□□□ -1.67
CCL1P22362 FMO7P-201ENST00000436045 768 ntBASIC4.65□□□□□ -1.67
CCL1P22362 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.65□□□□□ -1.67
CCL1P22362 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.65□□□□□ -1.67
CCL1P22362 AC019084.1-201ENST00000457337 432 ntBASIC4.65□□□□□ -1.67
CCL1P22362 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.65□□□□□ -1.67
CCL1P22362 AC079168.1-201ENST00000458741 345 ntBASIC4.65□□□□□ -1.67
CCL1P22362 RN7SL168P-201ENST00000463821 279 ntBASIC4.65□□□□□ -1.67
CCL1P22362 RN7SL814P-201ENST00000487715 300 ntBASIC4.65□□□□□ -1.67
CCL1P22362 AC138866.2-201ENST00000508650 584 ntBASIC4.65□□□□□ -1.67
CCL1P22362 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.65□□□□□ -1.67
CCL1P22362 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.65□□□□□ -1.67
CCL1P22362 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC4.65□□□□□ -1.67
CCL1P22362 AL359219.2-201ENST00000555184 348 ntBASIC4.65□□□□□ -1.67
CCL1P22362 AL049872.1-201ENST00000556323 322 ntBASIC4.65□□□□□ -1.67
CCL1P22362 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.65□□□□□ -1.67
CCL1P22362 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.65□□□□□ -1.67
CCL1P22362 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.65□□□□□ -1.67
CCL1P22362 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC4.65□□□□□ -1.67
CCL1P22362 AC125494.2-201ENST00000602431 657 ntBASIC4.65□□□□□ -1.67
CCL1P22362 AC009027.1-201ENST00000604510 479 ntBASIC4.65□□□□□ -1.67
CCL1P22362 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.65□□□□□ -1.67
CCL1P22362 AL096712.1-201ENST00000614561 159 ntBASIC4.65□□□□□ -1.67
CCL1P22362 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
CCL1P22362 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC4.65□□□□□ -1.67
CCL1P22362 FRG1EP-201ENST00000634469 770 ntBASIC4.65□□□□□ -1.67
CCL1P22362 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.65□□□□□ -1.67
CCL1P22362 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CCL1P22362 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CCL1P22362 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CCL1P22362 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC4.65□□□□□ -1.67
CCL1P22362 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
CCL1P22362 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.64□□□□□ -1.67
CCL1P22362 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCL1P22362 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.64□□□□□ -1.67
CCL1P22362 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCL1P22362 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CCL1P22362 AC015689.2-201ENST00000528172 1738 ntBASIC4.64□□□□□ -1.67
CCL1P22362 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCL1P22362 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.64□□□□□ -1.67
CCL1P22362 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CCL1P22362 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
CCL1P22362 AC007618.1-201ENST00000366455 732 ntBASIC4.64□□□□□ -1.67
CCL1P22362 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
CCL1P22362 OR7E156P-201ENST00000400303 464 ntBASIC4.64□□□□□ -1.67
CCL1P22362 AL358178.1-201ENST00000407698 397 ntBASIC4.64□□□□□ -1.67
CCL1P22362 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC4.64□□□□□ -1.67
CCL1P22362 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.64□□□□□ -1.67
CCL1P22362 HMGN1P20-201ENST00000411849 300 ntBASIC4.64□□□□□ -1.67
CCL1P22362 OR2AT2P-201ENST00000413438 905 ntBASIC4.64□□□□□ -1.67
CCL1P22362 SLC20A1P1-201ENST00000413906 956 ntBASIC4.64□□□□□ -1.67
CCL1P22362 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.64□□□□□ -1.67
CCL1P22362 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.64□□□□□ -1.67
CCL1P22362 SRSF1P1-201ENST00000424058 520 ntBASIC4.64□□□□□ -1.67
CCL1P22362 PRUNEP1-201ENST00000425846 705 ntBASIC4.64□□□□□ -1.67
CCL1P22362 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CCL1P22362 HMGN2P27-201ENST00000427352 270 ntBASIC4.64□□□□□ -1.67
CCL1P22362 SUMO2P3-201ENST00000438311 288 ntBASIC4.64□□□□□ -1.67
CCL1P22362 GAPDHP25-201ENST00000447061 1001 ntBASIC4.64□□□□□ -1.67
CCL1P22362 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC4.64□□□□□ -1.67
CCL1P22362 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.64□□□□□ -1.67
CCL1P22362 RN7SL72P-201ENST00000460697 269 ntBASIC4.64□□□□□ -1.67
CCL1P22362 AC021660.1-201ENST00000465006 554 ntBASIC4.64□□□□□ -1.67
CCL1P22362 AC093827.1-201ENST00000480094 861 ntBASIC4.64□□□□□ -1.67
CCL1P22362 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.64□□□□□ -1.67
CCL1P22362 EIF3LP3-201ENST00000495197 822 ntBASIC4.64□□□□□ -1.67
CCL1P22362 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCL1P22362 SCARNA16.4-201ENST00000516956 187 ntBASIC4.64□□□□□ -1.67
CCL1P22362 BCAS2P1-201ENST00000528022 632 ntBASIC4.64□□□□□ -1.67
CCL1P22362 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC4.64□□□□□ -1.67
CCL1P22362 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC4.64□□□□□ -1.67
CCL1P22362 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.64□□□□□ -1.67
CCL1P22362 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.64□□□□□ -1.67
CCL1P22362 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC4.64□□□□□ -1.67
CCL1P22362 AC005341.1-201ENST00000571086 708 ntBASIC4.64□□□□□ -1.67
CCL1P22362 AC010547.6-201ENST00000571789 193 ntBASIC4.64□□□□□ -1.67
CCL1P22362 AC134669.1-201ENST00000581275 672 ntBASIC4.64□□□□□ -1.67
CCL1P22362 AC107993.1-201ENST00000591343 684 ntBASIC4.64□□□□□ -1.67
CCL1P22362 AC008833.1-201ENST00000611633 691 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms