Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC083806.2-201ENST00000617795 2685 ntBASIC7.68□□□□□ -1.18
ERCC3P19447 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC7.68□□□□□ -1.18
ERCC3P19447 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC7.68□□□□□ -1.18
ERCC3P19447 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
ERCC3P19447 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
ERCC3P19447 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
ERCC3P19447 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
ERCC3P19447 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC7.68□□□□□ -1.18
ERCC3P19447 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
ERCC3P19447 CDC27P2-201ENST00000425026 1922 ntBASIC7.68□□□□□ -1.18
ERCC3P19447 AP003486.1-201ENST00000525716 3994 ntBASIC7.68□□□□□ -1.18
ERCC3P19447 AC034229.2-201ENST00000566945 2508 ntBASIC7.68□□□□□ -1.18
ERCC3P19447 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
ERCC3P19447 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC7.67□□□□□ -1.18
ERCC3P19447 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC7.67□□□□□ -1.18
ERCC3P19447 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
ERCC3P19447 AL137100.1-201ENST00000556703 1620 ntBASIC7.67□□□□□ -1.18
ERCC3P19447 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
ERCC3P19447 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
ERCC3P19447 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC7.67□□□□□ -1.18
ERCC3P19447 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
ERCC3P19447 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
ERCC3P19447 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
ERCC3P19447 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
ERCC3P19447 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
ERCC3P19447 RACGAP1P-201ENST00000550663 1879 ntBASIC7.67□□□□□ -1.18
ERCC3P19447 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
ERCC3P19447 SNORA38B-201ENST00000363524 131 ntBASIC7.67□□□□□ -1.18
ERCC3P19447 RN7SKP15-201ENST00000364742 309 ntBASIC7.67□□□□□ -1.18
ERCC3P19447 PKIB-203ENST00000368446 556 ntTSL 2 BASIC7.67□□□□□ -1.18
ERCC3P19447 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
ERCC3P19447 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
ERCC3P19447 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
ERCC3P19447 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC7.67□□□□□ -1.18
ERCC3P19447 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
ERCC3P19447 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
ERCC3P19447 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC7.67□□□□□ -1.18
ERCC3P19447 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC7.67□□□□□ -1.18
ERCC3P19447 AC022022.1-201ENST00000430304 178 ntBASIC7.67□□□□□ -1.18
ERCC3P19447 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC7.67□□□□□ -1.18
ERCC3P19447 RPS26P30-201ENST00000443431 335 ntBASIC7.67□□□□□ -1.18
ERCC3P19447 AL929288.2-201ENST00000446368 407 ntBASIC7.67□□□□□ -1.18
ERCC3P19447 RHEBP2-201ENST00000450289 600 ntBASIC7.67□□□□□ -1.18
ERCC3P19447 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC7.67□□□□□ -1.18
ERCC3P19447 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC7.67□□□□□ -1.18
ERCC3P19447 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
ERCC3P19447 AC091874.2-201ENST00000505889 720 ntBASIC7.67□□□□□ -1.18
ERCC3P19447 AC021220.1-201ENST00000507445 630 ntBASIC7.67□□□□□ -1.18
ERCC3P19447 HSD3BP3-201ENST00000514706 994 ntBASIC7.67□□□□□ -1.18
ERCC3P19447 SEPT10P1-201ENST00000517342 1162 ntBASIC7.67□□□□□ -1.18
ERCC3P19447 IGHVIII-38-1-201ENST00000521454 282 ntBASIC7.67□□□□□ -1.18
ERCC3P19447 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC7.67□□□□□ -1.18
ERCC3P19447 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
ERCC3P19447 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC7.67□□□□□ -1.18
ERCC3P19447 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC7.67□□□□□ -1.18
ERCC3P19447 POLR2KP1-201ENST00000553226 168 ntBASIC7.67□□□□□ -1.18
ERCC3P19447 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC7.67□□□□□ -1.18
ERCC3P19447 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC7.67□□□□□ -1.18
ERCC3P19447 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC7.67□□□□□ -1.18
ERCC3P19447 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC7.67□□□□□ -1.18
ERCC3P19447 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC7.67□□□□□ -1.18
ERCC3P19447 AC245008.1-201ENST00000608123 476 ntBASIC7.67□□□□□ -1.18
ERCC3P19447 OSTC-205ENST00000613215 876 ntTSL 2 BASIC7.67□□□□□ -1.18
ERCC3P19447 AL035661.1-201ENST00000620459 1144 ntBASIC7.67□□□□□ -1.18
ERCC3P19447 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
ERCC3P19447 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC7.67□□□□□ -1.18
ERCC3P19447 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC7.67□□□□□ -1.18
ERCC3P19447 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
ERCC3P19447 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC7.67□□□□□ -1.18
ERCC3P19447 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC7.67□□□□□ -1.18
ERCC3P19447 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
ERCC3P19447 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC7.67□□□□□ -1.18
ERCC3P19447 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC7.67□□□□□ -1.18
ERCC3P19447 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC7.67□□□□□ -1.18
ERCC3P19447 IFIT1P1-201ENST00000400497 1449 ntBASIC7.67□□□□□ -1.18
ERCC3P19447 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
ERCC3P19447 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
ERCC3P19447 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
ERCC3P19447 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
ERCC3P19447 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
ERCC3P19447 AC120338.1-201ENST00000625074 1541 ntBASIC7.67□□□□□ -1.18
ERCC3P19447 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC7.67□□□□□ -1.18
ERCC3P19447 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
ERCC3P19447 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
ERCC3P19447 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
ERCC3P19447 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC7.66□□□□□ -1.18
ERCC3P19447 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
ERCC3P19447 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
ERCC3P19447 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
ERCC3P19447 AC093297.3-201ENST00000607056 2517 ntBASIC7.66□□□□□ -1.18
ERCC3P19447 SNORA62.2-201ENST00000364672 152 ntBASIC7.66□□□□□ -1.18
ERCC3P19447 RNU1-84P-201ENST00000365447 164 ntBASIC7.66□□□□□ -1.18
ERCC3P19447 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
ERCC3P19447 MIR199B-201ENST00000384849 110 ntBASIC7.66□□□□□ -1.18
ERCC3P19447 SNORA40.2-201ENST00000390847 128 ntBASIC7.66□□□□□ -1.18
ERCC3P19447 RNA5SP198-201ENST00000410376 127 ntBASIC7.66□□□□□ -1.18
ERCC3P19447 RN7SKP222-201ENST00000410651 315 ntBASIC7.66□□□□□ -1.18
ERCC3P19447 RNU4-64P-201ENST00000410795 131 ntBASIC7.66□□□□□ -1.18
ERCC3P19447 KCTD9P1-201ENST00000430462 1167 ntBASIC7.66□□□□□ -1.18
ERCC3P19447 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC7.66□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 142 ms