Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HMGA1P17096 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HMGA1P17096 AC034229.2-201ENST00000566945 2508 ntBASIC5.56□□□□□ -1.52
HMGA1P17096 AC079097.1-201ENST00000512187 1399 ntBASIC5.56□□□□□ -1.52
HMGA1P17096 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HMGA1P17096 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC5.56□□□□□ -1.52
HMGA1P17096 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
HMGA1P17096 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HMGA1P17096 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
HMGA1P17096 AC100757.1-201ENST00000616872 1835 ntBASIC5.56□□□□□ -1.52
HMGA1P17096 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HMGA1P17096 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HMGA1P17096 MIR105-1-201ENST00000385222 81 ntBASIC5.56□□□□□ -1.52
HMGA1P17096 PPIAP9-201ENST00000403866 498 ntBASIC5.56□□□□□ -1.52
HMGA1P17096 RN7SKP125-201ENST00000410481 302 ntBASIC5.56□□□□□ -1.52
HMGA1P17096 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.56□□□□□ -1.52
HMGA1P17096 RPS27P18-201ENST00000431701 247 ntBASIC5.56□□□□□ -1.52
HMGA1P17096 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.56□□□□□ -1.52
HMGA1P17096 AC073072.2-201ENST00000447425 348 ntBASIC5.56□□□□□ -1.52
HMGA1P17096 RPL7P40-201ENST00000481703 745 ntBASIC5.56□□□□□ -1.52
HMGA1P17096 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.56□□□□□ -1.52
HMGA1P17096 AC110775.1-201ENST00000513721 462 ntBASIC5.56□□□□□ -1.52
HMGA1P17096 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.56□□□□□ -1.52
HMGA1P17096 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.56□□□□□ -1.52
HMGA1P17096 AP006245.2-201ENST00000522004 300 ntBASIC5.56□□□□□ -1.52
HMGA1P17096 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.56□□□□□ -1.52
HMGA1P17096 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.56□□□□□ -1.52
HMGA1P17096 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.56□□□□□ -1.52
HMGA1P17096 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.56□□□□□ -1.52
HMGA1P17096 AP001357.1-201ENST00000586304 1053 ntBASIC5.56□□□□□ -1.52
HMGA1P17096 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.56□□□□□ -1.52
HMGA1P17096 AC005252.1-201ENST00000604518 1063 ntBASIC5.56□□□□□ -1.52
HMGA1P17096 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.56□□□□□ -1.52
HMGA1P17096 AC093388.1-201ENST00000609166 430 ntBASIC5.56□□□□□ -1.52
HMGA1P17096 AC009163.6-201ENST00000612367 342 ntBASIC5.56□□□□□ -1.52
HMGA1P17096 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.56□□□□□ -1.52
HMGA1P17096 AP002799.1-201ENST00000623552 423 ntBASIC5.56□□□□□ -1.52
HMGA1P17096 PANDAR-201ENST00000629595 1506 ntBASIC5.56□□□□□ -1.52
HMGA1P17096 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
HMGA1P17096 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HMGA1P17096 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
HMGA1P17096 AC073365.1-203ENST00000641055 1992 ntBASIC5.56□□□□□ -1.52
HMGA1P17096 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HMGA1P17096 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HMGA1P17096 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
HMGA1P17096 HSPA8P18-201ENST00000439846 1928 ntBASIC5.56□□□□□ -1.52
HMGA1P17096 AC015799.1-201ENST00000622996 3122 ntBASIC5.56□□□□□ -1.52
HMGA1P17096 AL355488.2-201ENST00000609909 2850 ntBASIC5.56□□□□□ -1.52
HMGA1P17096 AC114947.2-201ENST00000565748 2125 ntBASIC5.56□□□□□ -1.52
HMGA1P17096 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
HMGA1P17096 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.56□□□□□ -1.52
HMGA1P17096 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
HMGA1P17096 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.56□□□□□ -1.52
HMGA1P17096 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HMGA1P17096 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
HMGA1P17096 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HMGA1P17096 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.56□□□□□ -1.52
HMGA1P17096 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HMGA1P17096 AC138907.8-201ENST00000623981 2256 ntBASIC5.55□□□□□ -1.52
HMGA1P17096 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.55□□□□□ -1.52
HMGA1P17096 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.55□□□□□ -1.52
HMGA1P17096 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.55□□□□□ -1.52
HMGA1P17096 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.55□□□□□ -1.52
HMGA1P17096 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.55□□□□□ -1.52
HMGA1P17096 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.55□□□□□ -1.52
HMGA1P17096 AC092070.2-203ENST00000598377 3644 ntBASIC5.55□□□□□ -1.52
HMGA1P17096 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMGA1P17096 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMGA1P17096 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMGA1P17096 U3.3-201ENST00000362986 216 ntBASIC5.55□□□□□ -1.52
HMGA1P17096 HSPA8P15-201ENST00000401676 786 ntBASIC5.55□□□□□ -1.52
HMGA1P17096 AL109941.1-201ENST00000401925 229 ntBASIC5.55□□□□□ -1.52
HMGA1P17096 RN7SKP126-201ENST00000411143 300 ntBASIC5.55□□□□□ -1.52
HMGA1P17096 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.55□□□□□ -1.52
HMGA1P17096 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.55□□□□□ -1.52
HMGA1P17096 AL590762.4-201ENST00000425885 253 ntBASIC5.55□□□□□ -1.52
HMGA1P17096 NDUFB4P8-201ENST00000435351 367 ntBASIC5.55□□□□□ -1.52
HMGA1P17096 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.55□□□□□ -1.52
HMGA1P17096 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC5.55□□□□□ -1.52
HMGA1P17096 AC092647.2-201ENST00000452998 253 ntBASIC5.55□□□□□ -1.52
HMGA1P17096 snoU13.29-201ENST00000459370 104 ntBASIC5.55□□□□□ -1.52
HMGA1P17096 RN7SL97P-201ENST00000486780 299 ntBASIC5.55□□□□□ -1.52
HMGA1P17096 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.55□□□□□ -1.52
HMGA1P17096 OR4A17P-201ENST00000526032 904 ntBASIC5.55□□□□□ -1.52
HMGA1P17096 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC5.55□□□□□ -1.52
HMGA1P17096 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.55□□□□□ -1.52
HMGA1P17096 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.55□□□□□ -1.52
HMGA1P17096 AC011447.4-201ENST00000587562 111 ntBASIC5.55□□□□□ -1.52
HMGA1P17096 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.55□□□□□ -1.52
HMGA1P17096 AL139124.1-201ENST00000609123 421 ntBASIC5.55□□□□□ -1.52
HMGA1P17096 AC244107.2-201ENST00000611773 76 ntBASIC5.55□□□□□ -1.52
HMGA1P17096 AL352984.2-202ENST00000613699 155 ntBASIC5.55□□□□□ -1.52
HMGA1P17096 AC020763.5-201ENST00000623298 430 ntBASIC5.55□□□□□ -1.52
HMGA1P17096 AC099494.2-201ENST00000623371 978 ntBASIC5.55□□□□□ -1.52
HMGA1P17096 AP003400.3-201ENST00000624904 346 ntBASIC5.55□□□□□ -1.52
HMGA1P17096 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMGA1P17096 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
HMGA1P17096 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
HMGA1P17096 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
HMGA1P17096 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms