Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.05□□□□□ -1.44
COL11A1P12107 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL11A1P12107 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.04□□□□□ -1.44
COL11A1P12107 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL11A1P12107 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
COL11A1P12107 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.04□□□□□ -1.44
COL11A1P12107 AC073365.1-203ENST00000641055 1992 ntBASIC6.04□□□□□ -1.44
COL11A1P12107 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COL11A1P12107 RNA5SP90-201ENST00000364801 99 ntBASIC6.04□□□□□ -1.44
COL11A1P12107 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.04□□□□□ -1.44
COL11A1P12107 AL590399.2-201ENST00000427536 309 ntBASIC6.04□□□□□ -1.44
COL11A1P12107 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC6.04□□□□□ -1.44
COL11A1P12107 AC073072.2-201ENST00000447425 348 ntBASIC6.04□□□□□ -1.44
COL11A1P12107 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC6.04□□□□□ -1.44
COL11A1P12107 snoU13.20-201ENST00000459180 104 ntBASIC6.04□□□□□ -1.44
COL11A1P12107 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC6.04□□□□□ -1.44
COL11A1P12107 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC6.04□□□□□ -1.44
COL11A1P12107 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC6.04□□□□□ -1.44
COL11A1P12107 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC6.04□□□□□ -1.44
COL11A1P12107 HNRNPCP1-201ENST00000556181 766 ntBASIC6.04□□□□□ -1.44
COL11A1P12107 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.04□□□□□ -1.44
COL11A1P12107 AC073575.2-201ENST00000614212 627 ntBASIC6.04□□□□□ -1.44
COL11A1P12107 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.04□□□□□ -1.44
COL11A1P12107 MAPK10-270ENST00000641102 3538 ntBASIC6.04□□□□□ -1.44
COL11A1P12107 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.04□□□□□ -1.44
COL11A1P12107 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL11A1P12107 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.04□□□□□ -1.44
COL11A1P12107 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL11A1P12107 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL11A1P12107 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
COL11A1P12107 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COL11A1P12107 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.04□□□□□ -1.44
COL11A1P12107 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
COL11A1P12107 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL11A1P12107 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL11A1P12107 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
COL11A1P12107 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COL11A1P12107 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC6.04□□□□□ -1.44
COL11A1P12107 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL11A1P12107 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL11A1P12107 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
COL11A1P12107 RPL11P3-201ENST00000395256 523 ntBASIC6.04□□□□□ -1.44
COL11A1P12107 AC093655.2-201ENST00000425735 631 ntBASIC6.04□□□□□ -1.44
COL11A1P12107 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COL11A1P12107 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC6.04□□□□□ -1.44
COL11A1P12107 RPL7P16-201ENST00000479738 738 ntBASIC6.04□□□□□ -1.44
COL11A1P12107 AC008897.1-201ENST00000494006 347 ntBASIC6.04□□□□□ -1.44
COL11A1P12107 AC004980.4-201ENST00000513375 203 ntBASIC6.04□□□□□ -1.44
COL11A1P12107 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.04□□□□□ -1.44
COL11A1P12107 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC6.04□□□□□ -1.44
COL11A1P12107 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.04□□□□□ -1.44
COL11A1P12107 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.04□□□□□ -1.44
COL11A1P12107 AC009117.1-201ENST00000563948 554 ntBASIC6.04□□□□□ -1.44
COL11A1P12107 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC6.04□□□□□ -1.44
COL11A1P12107 AC026951.1-201ENST00000559530 2459 ntBASIC6.04□□□□□ -1.44
COL11A1P12107 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL11A1P12107 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.03□□□□□ -1.44
COL11A1P12107 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COL11A1P12107 AC009779.8-201ENST00000641684 4384 ntBASIC6.03□□□□□ -1.44
COL11A1P12107 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.03□□□□□ -1.44
COL11A1P12107 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.03□□□□□ -1.44
COL11A1P12107 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
COL11A1P12107 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
COL11A1P12107 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL11A1P12107 U3.3-201ENST00000362986 216 ntBASIC6.03□□□□□ -1.44
COL11A1P12107 RNU1-74P-201ENST00000384108 171 ntBASIC6.03□□□□□ -1.44
COL11A1P12107 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC6.03□□□□□ -1.44
COL11A1P12107 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC6.03□□□□□ -1.44
COL11A1P12107 AC093414.1-201ENST00000434712 514 ntBASIC6.03□□□□□ -1.44
COL11A1P12107 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC6.03□□□□□ -1.44
COL11A1P12107 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC6.03□□□□□ -1.44
COL11A1P12107 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COL11A1P12107 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC6.03□□□□□ -1.44
COL11A1P12107 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC6.03□□□□□ -1.44
COL11A1P12107 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
COL11A1P12107 IL22RA2-203ENST00000349184 2801 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL11A1P12107 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL11A1P12107 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL11A1P12107 AL359955.1-201ENST00000455242 3275 ntBASIC6.03□□□□□ -1.44
COL11A1P12107 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COL11A1P12107 INTS6P1-201ENST00000504674 2530 ntBASIC6.03□□□□□ -1.44
COL11A1P12107 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COL11A1P12107 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
COL11A1P12107 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
COL11A1P12107 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL11A1P12107 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL11A1P12107 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL11A1P12107 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.02□□□□□ -1.45
COL11A1P12107 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC6.02□□□□□ -1.45
COL11A1P12107 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC6.02□□□□□ -1.45
COL11A1P12107 AC008072.1-201ENST00000434254 824 ntBASIC6.02□□□□□ -1.45
COL11A1P12107 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC6.02□□□□□ -1.45
COL11A1P12107 TAAR4P-201ENST00000454843 1039 ntBASIC6.02□□□□□ -1.45
COL11A1P12107 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC6.02□□□□□ -1.45
COL11A1P12107 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC6.02□□□□□ -1.45
COL11A1P12107 FTH1P2-201ENST00000466086 412 ntBASIC6.02□□□□□ -1.45
COL11A1P12107 RN7SL459P-201ENST00000481078 302 ntBASIC6.02□□□□□ -1.45
COL11A1P12107 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC6.02□□□□□ -1.45
COL11A1P12107 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
COL11A1P12107 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms