Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 MT-RNR2-201ENST00000387347 1559 ntBASIC6.04□□□□□ -1.44
CCDC172P0C7W6 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC172P0C7W6 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC6.04□□□□□ -1.44
CCDC172P0C7W6 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC172P0C7W6 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC172P0C7W6 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC172P0C7W6 AC025574.1-201ENST00000554784 1653 ntBASIC6.04□□□□□ -1.44
CCDC172P0C7W6 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CCDC172P0C7W6 PWAR1-201ENST00000624188 2414 ntBASIC6.04□□□□□ -1.44
CCDC172P0C7W6 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC6.03□□□□□ -1.44
CCDC172P0C7W6 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC172P0C7W6 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC172P0C7W6 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.03□□□□□ -1.44
CCDC172P0C7W6 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
CCDC172P0C7W6 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
CCDC172P0C7W6 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
CCDC172P0C7W6 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC172P0C7W6 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC172P0C7W6 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC172P0C7W6 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC172P0C7W6 RNA5SP273-201ENST00000362484 113 ntBASIC6.03□□□□□ -1.44
CCDC172P0C7W6 RNA5SP477-201ENST00000362639 119 ntBASIC6.03□□□□□ -1.44
CCDC172P0C7W6 RN7SKP145-201ENST00000363291 303 ntBASIC6.03□□□□□ -1.44
CCDC172P0C7W6 RNA5SP30-201ENST00000365552 115 ntBASIC6.03□□□□□ -1.44
CCDC172P0C7W6 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC6.03□□□□□ -1.44
CCDC172P0C7W6 SNORA70.6-201ENST00000383934 134 ntBASIC6.03□□□□□ -1.44
CCDC172P0C7W6 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CCDC172P0C7W6 AC004386.1-201ENST00000393214 761 ntBASIC6.03□□□□□ -1.44
CCDC172P0C7W6 NENFP1-201ENST00000419476 466 ntBASIC6.03□□□□□ -1.44
CCDC172P0C7W6 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC172P0C7W6 AC087672.1-201ENST00000479876 766 ntBASIC6.03□□□□□ -1.44
CCDC172P0C7W6 RPS3AP15-201ENST00000483874 781 ntBASIC6.03□□□□□ -1.44
CCDC172P0C7W6 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC172P0C7W6 OR5H7P-201ENST00000514084 930 ntBASIC6.03□□□□□ -1.44
CCDC172P0C7W6 AC011853.1-201ENST00000518911 454 ntBASIC6.03□□□□□ -1.44
CCDC172P0C7W6 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC172P0C7W6 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.03□□□□□ -1.44
CCDC172P0C7W6 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.03□□□□□ -1.44
CCDC172P0C7W6 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.03□□□□□ -1.44
CCDC172P0C7W6 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
CCDC172P0C7W6 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
CCDC172P0C7W6 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC172P0C7W6 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
CCDC172P0C7W6 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCDC172P0C7W6 MTCO1P15-201ENST00000529569 1526 ntBASIC6.03□□□□□ -1.44
CCDC172P0C7W6 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.03□□□□□ -1.44
CCDC172P0C7W6 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
CCDC172P0C7W6 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
CCDC172P0C7W6 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC6.02□□□□□ -1.44
CCDC172P0C7W6 MUC2-202ENST00000613187 4845 ntBASIC6.02□□□□□ -1.44
CCDC172P0C7W6 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC172P0C7W6 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.02□□□□□ -1.45
CCDC172P0C7W6 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC172P0C7W6 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC172P0C7W6 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC6.02□□□□□ -1.45
CCDC172P0C7W6 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC172P0C7W6 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC172P0C7W6 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC172P0C7W6 TRAV35-201ENST00000390462 330 ntBASIC6.02□□□□□ -1.45
CCDC172P0C7W6 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.02□□□□□ -1.45
CCDC172P0C7W6 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.02□□□□□ -1.45
CCDC172P0C7W6 RPL7P56-201ENST00000429441 717 ntBASIC6.02□□□□□ -1.45
CCDC172P0C7W6 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.02□□□□□ -1.45
CCDC172P0C7W6 AC073465.2-201ENST00000440938 498 ntBASIC6.02□□□□□ -1.45
CCDC172P0C7W6 CTSLP6-201ENST00000458273 1002 ntBASIC6.02□□□□□ -1.45
CCDC172P0C7W6 AC104339.1-201ENST00000465478 348 ntBASIC6.02□□□□□ -1.45
CCDC172P0C7W6 AC020779.1-201ENST00000478757 796 ntBASIC6.02□□□□□ -1.45
CCDC172P0C7W6 RN7SL346P-201ENST00000491561 294 ntBASIC6.02□□□□□ -1.45
CCDC172P0C7W6 DUTP7-201ENST00000507982 486 ntBASIC6.02□□□□□ -1.45
CCDC172P0C7W6 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.02□□□□□ -1.45
CCDC172P0C7W6 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.02□□□□□ -1.45
CCDC172P0C7W6 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.02□□□□□ -1.45
CCDC172P0C7W6 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.02□□□□□ -1.45
CCDC172P0C7W6 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.02□□□□□ -1.45
CCDC172P0C7W6 MIR7109-201ENST00000613748 65 ntBASIC6.02□□□□□ -1.45
CCDC172P0C7W6 AL390318.1-201ENST00000624564 687 ntBASIC6.02□□□□□ -1.45
CCDC172P0C7W6 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC172P0C7W6 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.02□□□□□ -1.45
CCDC172P0C7W6 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC172P0C7W6 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCDC172P0C7W6 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
CCDC172P0C7W6 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC172P0C7W6 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC172P0C7W6 AP001642.1-201ENST00000624727 2117 ntBASIC6.01□□□□□ -1.45
CCDC172P0C7W6 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC6.01□□□□□ -1.45
CCDC172P0C7W6 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC172P0C7W6 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC172P0C7W6 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC172P0C7W6 RNU1-150P-201ENST00000362491 162 ntBASIC6.01□□□□□ -1.45
CCDC172P0C7W6 RN7SKP28-201ENST00000364770 305 ntBASIC6.01□□□□□ -1.45
CCDC172P0C7W6 RPS3AP2-201ENST00000407190 754 ntBASIC6.01□□□□□ -1.45
CCDC172P0C7W6 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.01□□□□□ -1.45
CCDC172P0C7W6 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.01□□□□□ -1.45
CCDC172P0C7W6 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC6.01□□□□□ -1.45
CCDC172P0C7W6 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.01□□□□□ -1.45
CCDC172P0C7W6 AL359839.1-201ENST00000451975 1160 ntBASIC6.01□□□□□ -1.45
CCDC172P0C7W6 RPSAP37-201ENST00000470913 821 ntBASIC6.01□□□□□ -1.45
CCDC172P0C7W6 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC172P0C7W6 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC6.01□□□□□ -1.45
CCDC172P0C7W6 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms