Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC4.17□□□□□ -1.74
CXCL1P09341 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CXCL1P09341 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC4.17□□□□□ -1.74
CXCL1P09341 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC4.17□□□□□ -1.74
CXCL1P09341 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC4.17□□□□□ -1.74
CXCL1P09341 AC018946.1-201ENST00000560578 458 ntTSL 5 BASIC4.17□□□□□ -1.74
CXCL1P09341 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
CXCL1P09341 AL591222.2-201ENST00000604443 754 ntBASIC4.17□□□□□ -1.74
CXCL1P09341 Z93930.3-201ENST00000607919 749 ntBASIC4.17□□□□□ -1.74
CXCL1P09341 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CXCL1P09341 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CXCL1P09341 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC4.17□□□□□ -1.74
CXCL1P09341 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.17□□□□□ -1.74
CXCL1P09341 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.17□□□□□ -1.74
CXCL1P09341 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
CXCL1P09341 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.17□□□□□ -1.74
CXCL1P09341 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC4.17□□□□□ -1.74
CXCL1P09341 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC4.17□□□□□ -1.74
CXCL1P09341 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.17□□□□□ -1.74
CXCL1P09341 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CXCL1P09341 CDY11P-201ENST00000447168 1651 ntBASIC4.16□□□□□ -1.74
CXCL1P09341 LYARP1-201ENST00000436977 1501 ntBASIC4.16□□□□□ -1.74
CXCL1P09341 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CXCL1P09341 LINC01963-201ENST00000562038 3148 ntBASIC4.16□□□□□ -1.74
CXCL1P09341 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4.16□□□□□ -1.74
CXCL1P09341 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
CXCL1P09341 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CXCL1P09341 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
CXCL1P09341 OR51H2P-202ENST00000641424 3046 ntBASIC4.16□□□□□ -1.74
CXCL1P09341 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CXCL1P09341 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CXCL1P09341 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CXCL1P09341 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
CXCL1P09341 AL133260.1-201ENST00000405720 405 ntBASIC4.16□□□□□ -1.74
CXCL1P09341 NIFKP3-201ENST00000417799 865 ntBASIC4.16□□□□□ -1.74
CXCL1P09341 MARK2P12-201ENST00000420129 585 ntBASIC4.16□□□□□ -1.74
CXCL1P09341 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC4.16□□□□□ -1.74
CXCL1P09341 VN1R20P-201ENST00000425215 966 ntBASIC4.16□□□□□ -1.74
CXCL1P09341 FTLP19-201ENST00000433300 394 ntBASIC4.16□□□□□ -1.74
CXCL1P09341 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
CXCL1P09341 GAPDHP48-201ENST00000436626 961 ntBASIC4.16□□□□□ -1.74
CXCL1P09341 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.16□□□□□ -1.74
CXCL1P09341 AC010086.1-201ENST00000437359 1052 ntBASIC4.16□□□□□ -1.74
CXCL1P09341 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC4.16□□□□□ -1.74
CXCL1P09341 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CXCL1P09341 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC4.16□□□□□ -1.74
CXCL1P09341 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC4.16□□□□□ -1.74
CXCL1P09341 AL358876.1-201ENST00000453364 1075 ntBASIC4.16□□□□□ -1.74
CXCL1P09341 RBMY2HP-201ENST00000457961 720 ntBASIC4.16□□□□□ -1.74
CXCL1P09341 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC4.16□□□□□ -1.74
CXCL1P09341 MTCO1P55-201ENST00000489829 745 ntBASIC4.16□□□□□ -1.74
CXCL1P09341 RPS24P16-201ENST00000497294 392 ntBASIC4.16□□□□□ -1.74
CXCL1P09341 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.16□□□□□ -1.74
CXCL1P09341 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC4.16□□□□□ -1.74
CXCL1P09341 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.16□□□□□ -1.74
CXCL1P09341 MIR4311-201ENST00000580794 100 ntBASIC4.16□□□□□ -1.74
CXCL1P09341 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.16□□□□□ -1.74
CXCL1P09341 AC005244.1-201ENST00000582566 339 ntBASIC4.16□□□□□ -1.74
CXCL1P09341 AC024267.2-201ENST00000582737 417 ntBASIC4.16□□□□□ -1.74
CXCL1P09341 AC233280.2-201ENST00000603917 1070 ntBASIC4.16□□□□□ -1.74
CXCL1P09341 MIR6736-201ENST00000616799 59 ntBASIC4.16□□□□□ -1.74
CXCL1P09341 MIR6839-201ENST00000620425 113 ntBASIC4.16□□□□□ -1.74
CXCL1P09341 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC4.16□□□□□ -1.74
CXCL1P09341 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.16□□□□□ -1.74
CXCL1P09341 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CXCL1P09341 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CXCL1P09341 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CXCL1P09341 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.16□□□□□ -1.74
CXCL1P09341 DLD-205ENST00000440410 1993 ntTSL 2 BASIC4.16□□□□□ -1.74
CXCL1P09341 DDX18P6-201ENST00000450119 1997 ntBASIC4.16□□□□□ -1.74
CXCL1P09341 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.16□□□□□ -1.74
CXCL1P09341 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.16□□□□□ -1.74
CXCL1P09341 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
CXCL1P09341 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.16□□□□□ -1.74
CXCL1P09341 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
CXCL1P09341 AC120338.1-201ENST00000625074 1541 ntBASIC4.16□□□□□ -1.74
CXCL1P09341 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
CXCL1P09341 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC4.15□□□□□ -1.74
CXCL1P09341 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.15□□□□□ -1.74
CXCL1P09341 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CXCL1P09341 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CXCL1P09341 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CXCL1P09341 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.15□□□□□ -1.74
CXCL1P09341 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.15□□□□□ -1.74
CXCL1P09341 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
CXCL1P09341 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.74
CXCL1P09341 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
CXCL1P09341 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.15□□□□□ -1.74
CXCL1P09341 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.15□□□□□ -1.74
CXCL1P09341 AL672167.1-205ENST00000641112 3080 ntBASIC4.15□□□□□ -1.75
CXCL1P09341 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.15□□□□□ -1.75
CXCL1P09341 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC4.15□□□□□ -1.75
CXCL1P09341 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC4.15□□□□□ -1.75
CXCL1P09341 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CXCL1P09341 RNA5SP110-201ENST00000362638 115 ntBASIC4.15□□□□□ -1.75
CXCL1P09341 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CXCL1P09341 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
CXCL1P09341 MEAF6P1-201ENST00000416092 327 ntBASIC4.15□□□□□ -1.75
CXCL1P09341 EIF4A1P1-201ENST00000420241 934 ntBASIC4.15□□□□□ -1.75
CXCL1P09341 AC092865.3-201ENST00000425390 1026 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms