Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AC099654.3-201ENST00000447087 1546 ntBASIC6.12□□□□□ -1.43
TPM3P06753 AC009963.3-201ENST00000458090 486 ntBASIC6.12□□□□□ -1.43
TPM3P06753 RPL32P33-201ENST00000487023 394 ntBASIC6.12□□□□□ -1.43
TPM3P06753 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TPM3P06753 DUTP7-201ENST00000507982 486 ntBASIC6.12□□□□□ -1.43
TPM3P06753 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.12□□□□□ -1.43
TPM3P06753 AL356801.1-201ENST00000559320 294 ntBASIC6.12□□□□□ -1.43
TPM3P06753 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC6.12□□□□□ -1.43
TPM3P06753 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.12□□□□□ -1.43
TPM3P06753 AC100778.3-201ENST00000580060 1750 ntBASIC6.12□□□□□ -1.43
TPM3P06753 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TPM3P06753 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.12□□□□□ -1.43
TPM3P06753 RNU6-84P-201ENST00000607737 102 ntBASIC6.12□□□□□ -1.43
TPM3P06753 AL451049.1-201ENST00000608672 497 ntBASIC6.12□□□□□ -1.43
TPM3P06753 AC092266.1-201ENST00000610958 165 ntBASIC6.12□□□□□ -1.43
TPM3P06753 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC6.12□□□□□ -1.43
TPM3P06753 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TPM3P06753 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
TPM3P06753 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
TPM3P06753 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
TPM3P06753 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
TPM3P06753 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TPM3P06753 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
TPM3P06753 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
TPM3P06753 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.11□□□□□ -1.43
TPM3P06753 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
TPM3P06753 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TPM3P06753 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TPM3P06753 GAPDHP24-201ENST00000328713 983 ntBASIC6.11□□□□□ -1.43
TPM3P06753 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
TPM3P06753 RNA5SP30-201ENST00000365552 115 ntBASIC6.11□□□□□ -1.43
TPM3P06753 RBBP4P5-201ENST00000398583 1266 ntBASIC6.11□□□□□ -1.43
TPM3P06753 RN7SKP286-201ENST00000410894 299 ntBASIC6.11□□□□□ -1.43
TPM3P06753 MRPL53P1-201ENST00000414323 319 ntBASIC6.11□□□□□ -1.43
TPM3P06753 BX284632.2-201ENST00000421091 399 ntBASIC6.11□□□□□ -1.43
TPM3P06753 RPSAP32-201ENST00000432681 526 ntBASIC6.11□□□□□ -1.43
TPM3P06753 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.11□□□□□ -1.43
TPM3P06753 AL512605.1-202ENST00000441919 381 ntBASIC6.11□□□□□ -1.43
TPM3P06753 AL359955.2-201ENST00000445380 353 ntBASIC6.11□□□□□ -1.43
TPM3P06753 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.11□□□□□ -1.43
TPM3P06753 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.11□□□□□ -1.43
TPM3P06753 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC6.11□□□□□ -1.43
TPM3P06753 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.11□□□□□ -1.43
TPM3P06753 RNU6-1334P-201ENST00000516032 105 ntBASIC6.11□□□□□ -1.43
TPM3P06753 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
TPM3P06753 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.11□□□□□ -1.43
TPM3P06753 BNIP3P1-201ENST00000547295 580 ntBASIC6.11□□□□□ -1.43
TPM3P06753 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.11□□□□□ -1.43
TPM3P06753 AC007956.1-201ENST00000555623 542 ntBASIC6.11□□□□□ -1.43
TPM3P06753 SETP1-201ENST00000556014 845 ntBASIC6.11□□□□□ -1.43
TPM3P06753 OR1E3-201ENST00000575608 948 ntBASIC6.11□□□□□ -1.43
TPM3P06753 RN7SL435P-201ENST00000584418 282 ntBASIC6.11□□□□□ -1.43
TPM3P06753 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.11□□□□□ -1.43
TPM3P06753 uc_338.31-201ENST00000615595 186 ntBASIC6.11□□□□□ -1.43
TPM3P06753 AP000648.2-201ENST00000624182 404 ntBASIC6.11□□□□□ -1.43
TPM3P06753 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC6.11□□□□□ -1.43
TPM3P06753 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC6.11□□□□□ -1.43
TPM3P06753 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TPM3P06753 AC004817.4-201ENST00000602396 3625 ntBASIC6.11□□□□□ -1.43
TPM3P06753 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC6.11□□□□□ -1.43
TPM3P06753 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
TPM3P06753 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
TPM3P06753 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
TPM3P06753 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
TPM3P06753 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
TPM3P06753 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
TPM3P06753 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.1□□□□□ -1.43
TPM3P06753 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TPM3P06753 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
TPM3P06753 DDX18P6-201ENST00000450119 1997 ntBASIC6.1□□□□□ -1.43
TPM3P06753 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
TPM3P06753 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TPM3P06753 AL159987.1-201ENST00000347911 293 ntBASIC6.1□□□□□ -1.43
TPM3P06753 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TPM3P06753 MIR130B-202ENST00000385018 82 ntBASIC6.1□□□□□ -1.43
TPM3P06753 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
TPM3P06753 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
TPM3P06753 AC064862.5-201ENST00000440618 334 ntBASIC6.1□□□□□ -1.43
TPM3P06753 SNRPCP11-201ENST00000492453 205 ntBASIC6.1□□□□□ -1.43
TPM3P06753 AC009120.1-201ENST00000493458 473 ntBASIC6.1□□□□□ -1.43
TPM3P06753 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.1□□□□□ -1.43
TPM3P06753 RFPL4AP5-201ENST00000514977 504 ntBASIC6.1□□□□□ -1.43
TPM3P06753 RN7SKP238-201ENST00000516483 249 ntBASIC6.1□□□□□ -1.43
TPM3P06753 SCARNA20.4-201ENST00000516969 131 ntBASIC6.1□□□□□ -1.43
TPM3P06753 AC084121.1-201ENST00000533882 835 ntBASIC6.1□□□□□ -1.43
TPM3P06753 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.1□□□□□ -1.43
TPM3P06753 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC6.1□□□□□ -1.43
TPM3P06753 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.1□□□□□ -1.43
TPM3P06753 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.1□□□□□ -1.43
TPM3P06753 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
TPM3P06753 AC107993.1-201ENST00000591343 684 ntBASIC6.1□□□□□ -1.43
TPM3P06753 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC6.1□□□□□ -1.43
TPM3P06753 AC108673.3-201ENST00000609183 335 ntBASIC6.1□□□□□ -1.43
TPM3P06753 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.1□□□□□ -1.43
TPM3P06753 MIR6823-201ENST00000622118 61 ntBASIC6.1□□□□□ -1.43
TPM3P06753 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.1□□□□□ -1.43
TPM3P06753 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
TPM3P06753 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TPM3P06753 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
TPM3P06753 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms