Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 RNA5SP340-201ENST00000517132 107 ntBASIC5.2□□□□□ -1.58
MT-ND1P03886 PMS2P3-207ENST00000529061 717 ntBASIC5.2□□□□□ -1.58
MT-ND1P03886 PCNAP4-201ENST00000532690 730 ntBASIC5.2□□□□□ -1.58
MT-ND1P03886 AC084121.1-201ENST00000533882 835 ntBASIC5.2□□□□□ -1.58
MT-ND1P03886 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.2□□□□□ -1.58
MT-ND1P03886 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
MT-ND1P03886 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.2□□□□□ -1.58
MT-ND1P03886 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
MT-ND1P03886 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.2□□□□□ -1.58
MT-ND1P03886 AC009852.2-201ENST00000567898 485 ntBASIC5.2□□□□□ -1.58
MT-ND1P03886 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.2□□□□□ -1.58
MT-ND1P03886 AC010487.1-201ENST00000594408 1172 ntBASIC5.2□□□□□ -1.58
MT-ND1P03886 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.2□□□□□ -1.58
MT-ND1P03886 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.2□□□□□ -1.58
MT-ND1P03886 AL356608.1-201ENST00000610034 820 ntBASIC5.2□□□□□ -1.58
MT-ND1P03886 AL159169.2-201ENST00000610061 1269 ntBASIC5.2□□□□□ -1.58
MT-ND1P03886 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
MT-ND1P03886 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
MT-ND1P03886 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
MT-ND1P03886 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
MT-ND1P03886 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.2□□□□□ -1.58
MT-ND1P03886 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
MT-ND1P03886 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
MT-ND1P03886 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.2□□□□□ -1.58
MT-ND1P03886 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
MT-ND1P03886 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.2□□□□□ -1.58
MT-ND1P03886 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
MT-ND1P03886 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.2□□□□□ -1.58
MT-ND1P03886 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.19□□□□□ -1.58
MT-ND1P03886 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
MT-ND1P03886 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
MT-ND1P03886 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
MT-ND1P03886 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.19□□□□□ -1.58
MT-ND1P03886 AC007342.9-201ENST00000623877 1385 ntBASIC5.19□□□□□ -1.58
MT-ND1P03886 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
MT-ND1P03886 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
MT-ND1P03886 AC100757.1-201ENST00000616872 1835 ntBASIC5.19□□□□□ -1.58
MT-ND1P03886 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.19□□□□□ -1.58
MT-ND1P03886 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.19□□□□□ -1.58
MT-ND1P03886 AL159987.1-201ENST00000347911 293 ntBASIC5.19□□□□□ -1.58
MT-ND1P03886 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
MT-ND1P03886 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
MT-ND1P03886 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.19□□□□□ -1.58
MT-ND1P03886 SNORD56.6-201ENST00000384569 71 ntBASIC5.19□□□□□ -1.58
MT-ND1P03886 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
MT-ND1P03886 MIR1275-201ENST00000408770 80 ntBASIC5.19□□□□□ -1.58
MT-ND1P03886 RAB9AP4-201ENST00000415230 609 ntBASIC5.19□□□□□ -1.58
MT-ND1P03886 RNF10P1-201ENST00000418589 369 ntBASIC5.19□□□□□ -1.58
MT-ND1P03886 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
MT-ND1P03886 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
MT-ND1P03886 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.19□□□□□ -1.58
MT-ND1P03886 AL138787.1-202ENST00000437804 898 ntBASIC5.19□□□□□ -1.58
MT-ND1P03886 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.19□□□□□ -1.58
MT-ND1P03886 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.19□□□□□ -1.58
MT-ND1P03886 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.19□□□□□ -1.58
MT-ND1P03886 AP000926.3-201ENST00000497201 299 ntBASIC5.19□□□□□ -1.58
MT-ND1P03886 LSM3P4-201ENST00000502948 309 ntBASIC5.19□□□□□ -1.58
MT-ND1P03886 IGBP1P4-201ENST00000503202 879 ntBASIC5.19□□□□□ -1.58
MT-ND1P03886 AC021106.1-201ENST00000509020 1058 ntBASIC5.19□□□□□ -1.58
MT-ND1P03886 AC091912.1-201ENST00000511351 248 ntBASIC5.19□□□□□ -1.58
MT-ND1P03886 RN7SKP34-201ENST00000516142 244 ntBASIC5.19□□□□□ -1.58
MT-ND1P03886 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.19□□□□□ -1.58
MT-ND1P03886 AC027026.1-201ENST00000532323 742 ntBASIC5.19□□□□□ -1.58
MT-ND1P03886 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC5.19□□□□□ -1.58
MT-ND1P03886 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.19□□□□□ -1.58
MT-ND1P03886 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
MT-ND1P03886 DUX4L52-201ENST00000549363 777 ntBASIC5.19□□□□□ -1.58
MT-ND1P03886 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.19□□□□□ -1.58
MT-ND1P03886 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.19□□□□□ -1.58
MT-ND1P03886 AC002310.3-201ENST00000569728 723 ntBASIC5.19□□□□□ -1.58
MT-ND1P03886 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.19□□□□□ -1.58
MT-ND1P03886 MIR7853-201ENST00000584820 132 ntBASIC5.19□□□□□ -1.58
MT-ND1P03886 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.19□□□□□ -1.58
MT-ND1P03886 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.19□□□□□ -1.58
MT-ND1P03886 AC008833.1-201ENST00000611633 691 ntBASIC5.19□□□□□ -1.58
MT-ND1P03886 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
MT-ND1P03886 AL158062.1-201ENST00000619632 745 ntBASIC5.19□□□□□ -1.58
MT-ND1P03886 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
MT-ND1P03886 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
MT-ND1P03886 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
MT-ND1P03886 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
MT-ND1P03886 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
MT-ND1P03886 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.19□□□□□ -1.58
MT-ND1P03886 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.19□□□□□ -1.58
MT-ND1P03886 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
MT-ND1P03886 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.19□□□□□ -1.58
MT-ND1P03886 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
MT-ND1P03886 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.18□□□□□ -1.58
MT-ND1P03886 AP001284.1-201ENST00000528393 2118 ntBASIC5.18□□□□□ -1.58
MT-ND1P03886 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
MT-ND1P03886 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
MT-ND1P03886 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.18□□□□□ -1.58
MT-ND1P03886 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
MT-ND1P03886 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
MT-ND1P03886 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.18□□□□□ -1.58
MT-ND1P03886 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
MT-ND1P03886 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
MT-ND1P03886 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
MT-ND1P03886 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
MT-ND1P03886 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms