Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.82□□□□□ -1.48
APOEP02649 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
APOEP02649 RN7SKP269-201ENST00000365545 319 ntBASIC5.82□□□□□ -1.48
APOEP02649 AL512422.1-201ENST00000407033 553 ntBASIC5.82□□□□□ -1.48
APOEP02649 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.82□□□□□ -1.48
APOEP02649 AL513325.1-201ENST00000417716 1034 ntBASIC5.82□□□□□ -1.48
APOEP02649 OR10T1P-201ENST00000424327 947 ntBASIC5.82□□□□□ -1.48
APOEP02649 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.82□□□□□ -1.48
APOEP02649 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.82□□□□□ -1.48
APOEP02649 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.82□□□□□ -1.48
APOEP02649 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.82□□□□□ -1.48
APOEP02649 PPIAP20-201ENST00000449839 135 ntBASIC5.82□□□□□ -1.48
APOEP02649 VDAC2P4-201ENST00000452925 711 ntBASIC5.82□□□□□ -1.48
APOEP02649 RN7SL197P-201ENST00000466981 299 ntBASIC5.82□□□□□ -1.48
APOEP02649 RN7SL101P-201ENST00000496350 279 ntBASIC5.82□□□□□ -1.48
APOEP02649 AL136038.1-201ENST00000497246 351 ntBASIC5.82□□□□□ -1.48
APOEP02649 RN7SL466P-201ENST00000497546 295 ntBASIC5.82□□□□□ -1.48
APOEP02649 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.82□□□□□ -1.48
APOEP02649 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.82□□□□□ -1.48
APOEP02649 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.82□□□□□ -1.48
APOEP02649 AC137627.1-201ENST00000545761 289 ntBASIC5.82□□□□□ -1.48
APOEP02649 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.82□□□□□ -1.48
APOEP02649 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.82□□□□□ -1.48
APOEP02649 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.82□□□□□ -1.48
APOEP02649 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.82□□□□□ -1.48
APOEP02649 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
APOEP02649 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.82□□□□□ -1.48
APOEP02649 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
APOEP02649 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
APOEP02649 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.82□□□□□ -1.48
APOEP02649 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.82□□□□□ -1.48
APOEP02649 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.82□□□□□ -1.48
APOEP02649 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
APOEP02649 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.82□□□□□ -1.48
APOEP02649 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
APOEP02649 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
APOEP02649 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
APOEP02649 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
APOEP02649 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.81□□□□□ -1.48
APOEP02649 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.81□□□□□ -1.48
APOEP02649 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.81□□□□□ -1.48
APOEP02649 MT-RNR2-201ENST00000387347 1559 ntBASIC5.81□□□□□ -1.48
APOEP02649 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
APOEP02649 GAPDHP24-201ENST00000328713 983 ntBASIC5.81□□□□□ -1.48
APOEP02649 AL121886.1-201ENST00000358609 435 ntBASIC5.81□□□□□ -1.48
APOEP02649 RNU4-2-201ENST00000365668 141 ntBASIC5.81□□□□□ -1.48
APOEP02649 MIR551A-201ENST00000385042 96 ntBASIC5.81□□□□□ -1.48
APOEP02649 MIR143-201ENST00000385300 106 ntBASIC5.81□□□□□ -1.48
APOEP02649 RN7SKP206-201ENST00000410823 293 ntBASIC5.81□□□□□ -1.48
APOEP02649 AC096921.1-201ENST00000411661 375 ntBASIC5.81□□□□□ -1.48
APOEP02649 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.81□□□□□ -1.48
APOEP02649 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.81□□□□□ -1.48
APOEP02649 CHEK2P5-201ENST00000423877 246 ntBASIC5.81□□□□□ -1.48
APOEP02649 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.81□□□□□ -1.48
APOEP02649 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.81□□□□□ -1.48
APOEP02649 MTND2P40-201ENST00000436718 841 ntBASIC5.81□□□□□ -1.48
APOEP02649 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.81□□□□□ -1.48
APOEP02649 AC023271.1-201ENST00000445936 1090 ntBASIC5.81□□□□□ -1.48
APOEP02649 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC5.81□□□□□ -1.48
APOEP02649 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.81□□□□□ -1.48
APOEP02649 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC5.81□□□□□ -1.48
APOEP02649 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.81□□□□□ -1.48
APOEP02649 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.81□□□□□ -1.48
APOEP02649 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.81□□□□□ -1.48
APOEP02649 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.81□□□□□ -1.48
APOEP02649 SNORD95-201ENST00000579879 68 ntBASIC5.81□□□□□ -1.48
APOEP02649 MIR1273E-201ENST00000581165 102 ntBASIC5.81□□□□□ -1.48
APOEP02649 H3F3BP2-201ENST00000583907 357 ntBASIC5.81□□□□□ -1.48
APOEP02649 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.81□□□□□ -1.48
APOEP02649 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.81□□□□□ -1.48
APOEP02649 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.81□□□□□ -1.48
APOEP02649 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.81□□□□□ -1.48
APOEP02649 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
APOEP02649 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
APOEP02649 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
APOEP02649 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
APOEP02649 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
APOEP02649 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
APOEP02649 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
APOEP02649 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
APOEP02649 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
APOEP02649 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
APOEP02649 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
APOEP02649 AL132656.3-201ENST00000606384 1595 ntBASIC5.8□□□□□ -1.48
APOEP02649 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.8□□□□□ -1.48
APOEP02649 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
APOEP02649 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.8□□□□□ -1.48
APOEP02649 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
APOEP02649 AC005042.1-201ENST00000393397 800 ntBASIC5.8□□□□□ -1.48
APOEP02649 AL009179.1-201ENST00000406085 265 ntBASIC5.8□□□□□ -1.48
APOEP02649 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.8□□□□□ -1.48
APOEP02649 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
APOEP02649 NANOGP9-201ENST00000439890 892 ntBASIC5.8□□□□□ -1.48
APOEP02649 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.8□□□□□ -1.48
APOEP02649 MED28P3-201ENST00000444288 531 ntBASIC5.8□□□□□ -1.48
APOEP02649 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.8□□□□□ -1.48
APOEP02649 AL450023.1-201ENST00000450868 751 ntBASIC5.8□□□□□ -1.48
APOEP02649 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
APOEP02649 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.8□□□□□ -1.48
APOEP02649 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms