Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 NDUFA12P1-201ENST00000455914 406 ntBASIC8.31□□□□□ -1.08
RAPGEF3O95398 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC8.31□□□□□ -1.08
RAPGEF3O95398 RNU6ATAC39P-201ENST00000516309 149 ntBASIC8.31□□□□□ -1.08
RAPGEF3O95398 RNA5SP373-201ENST00000517271 95 ntBASIC8.31□□□□□ -1.08
RAPGEF3O95398 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC8.31□□□□□ -1.08
RAPGEF3O95398 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC8.31□□□□□ -1.08
RAPGEF3O95398 AC090424.1-201ENST00000535243 736 ntBASIC8.31□□□□□ -1.08
RAPGEF3O95398 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC8.31□□□□□ -1.08
RAPGEF3O95398 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC8.31□□□□□ -1.08
RAPGEF3O95398 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC8.31□□□□□ -1.08
RAPGEF3O95398 AL161616.1-201ENST00000611867 286 ntBASIC8.31□□□□□ -1.08
RAPGEF3O95398 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
RAPGEF3O95398 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
RAPGEF3O95398 MTND4P21-201ENST00000453886 1357 ntBASIC8.31□□□□□ -1.08
RAPGEF3O95398 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
RAPGEF3O95398 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC8.31□□□□□ -1.08
RAPGEF3O95398 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
RAPGEF3O95398 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
RAPGEF3O95398 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC8.31□□□□□ -1.08
RAPGEF3O95398 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
RAPGEF3O95398 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC8.31□□□□□ -1.08
RAPGEF3O95398 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
RAPGEF3O95398 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
RAPGEF3O95398 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC8.3□□□□□ -1.08
RAPGEF3O95398 AC132825.1-201ENST00000463573 2247 ntBASIC8.3□□□□□ -1.08
RAPGEF3O95398 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
RAPGEF3O95398 ALB-219ENST00000621085 1418 ntTSL 5 BASIC8.3□□□□□ -1.08
RAPGEF3O95398 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
RAPGEF3O95398 ZNF840P-201ENST00000504759 1996 ntBASIC8.3□□□□□ -1.08
RAPGEF3O95398 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
RAPGEF3O95398 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC8.3□□□□□ -1.08
RAPGEF3O95398 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
RAPGEF3O95398 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
RAPGEF3O95398 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC8.3□□□□□ -1.08
RAPGEF3O95398 OR2AM1P-201ENST00000422137 422 ntBASIC8.3□□□□□ -1.08
RAPGEF3O95398 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
RAPGEF3O95398 MGAT2P2-201ENST00000427194 797 ntBASIC8.3□□□□□ -1.08
RAPGEF3O95398 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC8.3□□□□□ -1.08
RAPGEF3O95398 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC8.3□□□□□ -1.08
RAPGEF3O95398 CYCSP53-201ENST00000455540 265 ntBASIC8.3□□□□□ -1.08
RAPGEF3O95398 AC103987.1-201ENST00000473394 348 ntBASIC8.3□□□□□ -1.08
RAPGEF3O95398 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC8.3□□□□□ -1.08
RAPGEF3O95398 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC8.3□□□□□ -1.08
RAPGEF3O95398 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC8.3□□□□□ -1.08
RAPGEF3O95398 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC8.3□□□□□ -1.08
RAPGEF3O95398 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC8.3□□□□□ -1.08
RAPGEF3O95398 BNIP3P35-201ENST00000604530 490 ntBASIC8.3□□□□□ -1.08
RAPGEF3O95398 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC8.3□□□□□ -1.08
RAPGEF3O95398 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC8.3□□□□□ -1.08
RAPGEF3O95398 AC253576.2-201ENST00000618815 580 ntBASIC8.3□□□□□ -1.08
RAPGEF3O95398 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
RAPGEF3O95398 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
RAPGEF3O95398 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC8.3□□□□□ -1.08
RAPGEF3O95398 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
RAPGEF3O95398 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
RAPGEF3O95398 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC8.3□□□□□ -1.08
RAPGEF3O95398 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
RAPGEF3O95398 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
RAPGEF3O95398 IRF5P1-201ENST00000504852 2164 ntBASIC8.29□□□□□ -1.08
RAPGEF3O95398 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
RAPGEF3O95398 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC8.29□□□□□ -1.08
RAPGEF3O95398 OR51C1P-202ENST00000641159 1444 ntBASIC8.29□□□□□ -1.08
RAPGEF3O95398 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
RAPGEF3O95398 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
RAPGEF3O95398 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
RAPGEF3O95398 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RAPGEF3O95398 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC8.29□□□□□ -1.08
RAPGEF3O95398 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
RAPGEF3O95398 RNA5SP487-201ENST00000410186 122 ntBASIC8.29□□□□□ -1.08
RAPGEF3O95398 AL133482.1-201ENST00000415988 498 ntBASIC8.29□□□□□ -1.08
RAPGEF3O95398 OR5M12P-201ENST00000423388 929 ntBASIC8.29□□□□□ -1.08
RAPGEF3O95398 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC8.29□□□□□ -1.08
RAPGEF3O95398 AL590623.1-201ENST00000427864 105 ntBASIC8.29□□□□□ -1.08
RAPGEF3O95398 GSTM5P1-201ENST00000434751 660 ntBASIC8.29□□□□□ -1.08
RAPGEF3O95398 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC8.29□□□□□ -1.08
RAPGEF3O95398 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC8.29□□□□□ -1.08
RAPGEF3O95398 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC8.29□□□□□ -1.08
RAPGEF3O95398 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC8.29□□□□□ -1.08
RAPGEF3O95398 MTCYBP14-201ENST00000457471 715 ntBASIC8.29□□□□□ -1.08
RAPGEF3O95398 RN7SL354P-201ENST00000469282 294 ntBASIC8.29□□□□□ -1.08
RAPGEF3O95398 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC8.29□□□□□ -1.08
RAPGEF3O95398 RPS4XP20-201ENST00000505751 772 ntBASIC8.29□□□□□ -1.08
RAPGEF3O95398 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC8.29□□□□□ -1.08
RAPGEF3O95398 AC024940.3-201ENST00000538551 316 ntBASIC8.29□□□□□ -1.08
RAPGEF3O95398 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC8.29□□□□□ -1.08
RAPGEF3O95398 AC008033.2-201ENST00000542626 177 ntBASIC8.29□□□□□ -1.08
RAPGEF3O95398 AC244502.2-201ENST00000543361 851 ntBASIC8.29□□□□□ -1.08
RAPGEF3O95398 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC8.29□□□□□ -1.08
RAPGEF3O95398 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC8.29□□□□□ -1.08
RAPGEF3O95398 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC8.29□□□□□ -1.08
RAPGEF3O95398 AL356490.1-201ENST00000623079 479 ntBASIC8.29□□□□□ -1.08
RAPGEF3O95398 AC112694.2-201ENST00000623697 768 ntBASIC8.29□□□□□ -1.08
RAPGEF3O95398 AC074101.1-201ENST00000637861 241 ntBASIC8.29□□□□□ -1.08
RAPGEF3O95398 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC8.29□□□□□ -1.08
RAPGEF3O95398 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RAPGEF3O95398 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
RAPGEF3O95398 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC8.29□□□□□ -1.08
RAPGEF3O95398 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
RAPGEF3O95398 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC8.29□□□□□ -1.08
RAPGEF3O95398 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC8.29□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms