Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
FOXN3O00409 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
FOXN3O00409 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.29□□□□□ -1.4
FOXN3O00409 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
FOXN3O00409 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.29□□□□□ -1.4
FOXN3O00409 RN7SKP78-201ENST00000364711 318 ntBASIC6.29□□□□□ -1.4
FOXN3O00409 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.29□□□□□ -1.4
FOXN3O00409 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
FOXN3O00409 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
FOXN3O00409 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
FOXN3O00409 RNU6-31P-201ENST00000384388 108 ntBASIC6.29□□□□□ -1.4
FOXN3O00409 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.29□□□□□ -1.4
FOXN3O00409 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.29□□□□□ -1.4
FOXN3O00409 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.29□□□□□ -1.4
FOXN3O00409 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.29□□□□□ -1.4
FOXN3O00409 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.29□□□□□ -1.4
FOXN3O00409 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.29□□□□□ -1.4
FOXN3O00409 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC6.29□□□□□ -1.4
FOXN3O00409 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
FOXN3O00409 AC004129.2-201ENST00000457229 287 ntBASIC6.29□□□□□ -1.4
FOXN3O00409 AC009963.3-201ENST00000458090 486 ntBASIC6.29□□□□□ -1.4
FOXN3O00409 AC023194.2-201ENST00000465398 406 ntBASIC6.29□□□□□ -1.4
FOXN3O00409 AC092905.1-201ENST00000467527 949 ntBASIC6.29□□□□□ -1.4
FOXN3O00409 AL157777.1-201ENST00000468100 304 ntBASIC6.29□□□□□ -1.4
FOXN3O00409 AC079080.1-201ENST00000479841 822 ntBASIC6.29□□□□□ -1.4
FOXN3O00409 AC006539.1-201ENST00000481419 501 ntBASIC6.29□□□□□ -1.4
FOXN3O00409 AC112518.2-201ENST00000508565 425 ntBASIC6.29□□□□□ -1.4
FOXN3O00409 ST13P12-201ENST00000508958 1094 ntBASIC6.29□□□□□ -1.4
FOXN3O00409 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.29□□□□□ -1.4
FOXN3O00409 RNA5SP340-201ENST00000517132 107 ntBASIC6.29□□□□□ -1.4
FOXN3O00409 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.29□□□□□ -1.4
FOXN3O00409 SOX5P1-201ENST00000524155 1127 ntBASIC6.29□□□□□ -1.4
FOXN3O00409 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.29□□□□□ -1.4
FOXN3O00409 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC6.29□□□□□ -1.4
FOXN3O00409 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC6.29□□□□□ -1.4
FOXN3O00409 AC126615.2-201ENST00000553003 515 ntBASIC6.29□□□□□ -1.4
FOXN3O00409 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC6.29□□□□□ -1.4
FOXN3O00409 AC091078.2-201ENST00000557145 559 ntBASIC6.29□□□□□ -1.4
FOXN3O00409 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC6.29□□□□□ -1.4
FOXN3O00409 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC6.29□□□□□ -1.4
FOXN3O00409 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.29□□□□□ -1.4
FOXN3O00409 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.29□□□□□ -1.4
FOXN3O00409 BNIP3P40-201ENST00000596017 556 ntBASIC6.29□□□□□ -1.4
FOXN3O00409 AL158050.2-201ENST00000605336 568 ntBASIC6.29□□□□□ -1.4
FOXN3O00409 AL133481.2-203ENST00000607558 139 ntBASIC6.29□□□□□ -1.4
FOXN3O00409 AL136131.3-201ENST00000607600 188 ntBASIC6.29□□□□□ -1.4
FOXN3O00409 AL451049.1-201ENST00000608672 497 ntBASIC6.29□□□□□ -1.4
FOXN3O00409 AC108673.3-201ENST00000609183 335 ntBASIC6.29□□□□□ -1.4
FOXN3O00409 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.29□□□□□ -1.4
FOXN3O00409 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.29□□□□□ -1.4
FOXN3O00409 MIR6806-201ENST00000622141 64 ntBASIC6.29□□□□□ -1.4
FOXN3O00409 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.29□□□□□ -1.4
FOXN3O00409 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
FOXN3O00409 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
FOXN3O00409 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.28□□□□□ -1.4
FOXN3O00409 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC6.28□□□□□ -1.4
FOXN3O00409 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.28□□□□□ -1.4
FOXN3O00409 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.28□□□□□ -1.4
FOXN3O00409 AF287957.1-201ENST00000607368 1595 ntBASIC6.28□□□□□ -1.4
FOXN3O00409 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.28□□□□□ -1.4
FOXN3O00409 PARP4P2-201ENST00000446672 3326 ntBASIC6.28□□□□□ -1.4
FOXN3O00409 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
FOXN3O00409 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
FOXN3O00409 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
FOXN3O00409 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
FOXN3O00409 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
FOXN3O00409 RNU6-1263P-201ENST00000384601 106 ntBASIC6.28□□□□□ -1.4
FOXN3O00409 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
FOXN3O00409 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
FOXN3O00409 RNA5SP431-201ENST00000410312 120 ntBASIC6.28□□□□□ -1.4
FOXN3O00409 RNU4-27P-201ENST00000410889 139 ntBASIC6.28□□□□□ -1.4
FOXN3O00409 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.28□□□□□ -1.4
FOXN3O00409 CRIP1P1-201ENST00000427567 185 ntBASIC6.28□□□□□ -1.4
FOXN3O00409 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
FOXN3O00409 AL512637.2-201ENST00000431287 1256 ntBASIC6.28□□□□□ -1.4
FOXN3O00409 NDUFA5P10-201ENST00000432147 357 ntBASIC6.28□□□□□ -1.4
FOXN3O00409 MTCYBP29-201ENST00000436327 1006 ntBASIC6.28□□□□□ -1.4
FOXN3O00409 AL645931.1-201ENST00000439737 410 ntBASIC6.28□□□□□ -1.4
FOXN3O00409 AC023141.8-201ENST00000442554 208 ntBASIC6.28□□□□□ -1.4
FOXN3O00409 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC6.28□□□□□ -1.4
FOXN3O00409 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC6.28□□□□□ -1.4
FOXN3O00409 CLIC4P1-201ENST00000453177 535 ntBASIC6.28□□□□□ -1.4
FOXN3O00409 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC6.28□□□□□ -1.4
FOXN3O00409 RPL12P39-201ENST00000455456 496 ntBASIC6.28□□□□□ -1.4
FOXN3O00409 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC6.28□□□□□ -1.4
FOXN3O00409 AC093719.1-201ENST00000480427 441 ntBASIC6.28□□□□□ -1.4
FOXN3O00409 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
FOXN3O00409 AC093801.2-201ENST00000503966 1050 ntBASIC6.28□□□□□ -1.4
FOXN3O00409 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.28□□□□□ -1.4
FOXN3O00409 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.28□□□□□ -1.4
FOXN3O00409 PRMT5P1-201ENST00000514351 598 ntBASIC6.28□□□□□ -1.4
FOXN3O00409 MTND1P6-201ENST00000523621 946 ntBASIC6.28□□□□□ -1.4
FOXN3O00409 HAUS1P3-201ENST00000523909 662 ntBASIC6.28□□□□□ -1.4
FOXN3O00409 C1DP5-201ENST00000525775 383 ntBASIC6.28□□□□□ -1.4
FOXN3O00409 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC6.28□□□□□ -1.4
FOXN3O00409 AL121594.2-201ENST00000541658 472 ntBASIC6.28□□□□□ -1.4
FOXN3O00409 HNRNPCP1-201ENST00000556181 766 ntBASIC6.28□□□□□ -1.4
FOXN3O00409 RPA2P1-201ENST00000556557 721 ntBASIC6.28□□□□□ -1.4
FOXN3O00409 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.28□□□□□ -1.4
FOXN3O00409 AC025918.2-201ENST00000558683 763 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms