Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 OR14L1P-202ENST00000641545 3009 ntBASIC5.39□□□□□ -1.55
PDLIM1O00151 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.39□□□□□ -1.55
PDLIM1O00151 COX6B1P3-201ENST00000312310 260 ntBASIC5.39□□□□□ -1.55
PDLIM1O00151 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.39□□□□□ -1.55
PDLIM1O00151 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.39□□□□□ -1.55
PDLIM1O00151 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
PDLIM1O00151 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.39□□□□□ -1.55
PDLIM1O00151 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PDLIM1O00151 RPL35AP31-201ENST00000418340 337 ntBASIC5.39□□□□□ -1.55
PDLIM1O00151 RNGTTP1-201ENST00000420965 728 ntBASIC5.39□□□□□ -1.55
PDLIM1O00151 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.39□□□□□ -1.55
PDLIM1O00151 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.39□□□□□ -1.55
PDLIM1O00151 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.39□□□□□ -1.55
PDLIM1O00151 AL353662.1-201ENST00000439099 327 ntBASIC5.39□□□□□ -1.55
PDLIM1O00151 SEPT14P12-201ENST00000442280 560 ntBASIC5.39□□□□□ -1.55
PDLIM1O00151 RPL6P30-201ENST00000443382 862 ntBASIC5.39□□□□□ -1.55
PDLIM1O00151 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.39□□□□□ -1.55
PDLIM1O00151 AC011225.1-201ENST00000457751 369 ntBASIC5.39□□□□□ -1.55
PDLIM1O00151 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC5.39□□□□□ -1.55
PDLIM1O00151 AL591473.1-201ENST00000464297 313 ntBASIC5.39□□□□□ -1.55
PDLIM1O00151 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PDLIM1O00151 AC083795.1-201ENST00000491760 320 ntBASIC5.39□□□□□ -1.55
PDLIM1O00151 RBBP4P1-201ENST00000502424 1276 ntBASIC5.39□□□□□ -1.55
PDLIM1O00151 LSM3P4-201ENST00000502948 309 ntBASIC5.39□□□□□ -1.55
PDLIM1O00151 AL158068.1-201ENST00000506116 616 ntBASIC5.39□□□□□ -1.55
PDLIM1O00151 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC5.39□□□□□ -1.55
PDLIM1O00151 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.39□□□□□ -1.55
PDLIM1O00151 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.39□□□□□ -1.55
PDLIM1O00151 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
PDLIM1O00151 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.39□□□□□ -1.55
PDLIM1O00151 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.39□□□□□ -1.55
PDLIM1O00151 AC005363.1-201ENST00000530779 351 ntBASIC5.39□□□□□ -1.55
PDLIM1O00151 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.39□□□□□ -1.55
PDLIM1O00151 TOMM20P1-201ENST00000534518 427 ntBASIC5.39□□□□□ -1.55
PDLIM1O00151 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PDLIM1O00151 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.39□□□□□ -1.55
PDLIM1O00151 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.39□□□□□ -1.55
PDLIM1O00151 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.39□□□□□ -1.55
PDLIM1O00151 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.39□□□□□ -1.55
PDLIM1O00151 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC5.39□□□□□ -1.55
PDLIM1O00151 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.39□□□□□ -1.55
PDLIM1O00151 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.39□□□□□ -1.55
PDLIM1O00151 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.39□□□□□ -1.55
PDLIM1O00151 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.39□□□□□ -1.55
PDLIM1O00151 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PDLIM1O00151 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.39□□□□□ -1.55
PDLIM1O00151 AL133406.3-201ENST00000606817 541 ntBASIC5.39□□□□□ -1.55
PDLIM1O00151 RNU6-84P-201ENST00000607737 102 ntBASIC5.39□□□□□ -1.55
PDLIM1O00151 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.39□□□□□ -1.55
PDLIM1O00151 AC004801.6-201ENST00000616571 978 ntBASIC5.39□□□□□ -1.55
PDLIM1O00151 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.39□□□□□ -1.55
PDLIM1O00151 AL035661.1-201ENST00000620459 1144 ntBASIC5.39□□□□□ -1.55
PDLIM1O00151 AC015871.5-202ENST00000623252 701 ntBASIC5.39□□□□□ -1.55
PDLIM1O00151 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PDLIM1O00151 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDLIM1O00151 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.39□□□□□ -1.55
PDLIM1O00151 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDLIM1O00151 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDLIM1O00151 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
PDLIM1O00151 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDLIM1O00151 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.38□□□□□ -1.55
PDLIM1O00151 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.38□□□□□ -1.55
PDLIM1O00151 PSG10P-201ENST00000501199 1500 ntBASIC5.38□□□□□ -1.55
PDLIM1O00151 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.38□□□□□ -1.55
PDLIM1O00151 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDLIM1O00151 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.38□□□□□ -1.55
PDLIM1O00151 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDLIM1O00151 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.38□□□□□ -1.55
PDLIM1O00151 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDLIM1O00151 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDLIM1O00151 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDLIM1O00151 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.38□□□□□ -1.55
PDLIM1O00151 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.38□□□□□ -1.55
PDLIM1O00151 RNU1-134P-201ENST00000362935 165 ntBASIC5.38□□□□□ -1.55
PDLIM1O00151 MIR130B-202ENST00000385018 82 ntBASIC5.38□□□□□ -1.55
PDLIM1O00151 SNRPEP6-201ENST00000407465 277 ntBASIC5.38□□□□□ -1.55
PDLIM1O00151 RPS7P8-201ENST00000418311 581 ntBASIC5.38□□□□□ -1.55
PDLIM1O00151 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.38□□□□□ -1.55
PDLIM1O00151 SETP10-201ENST00000424368 814 ntBASIC5.38□□□□□ -1.55
PDLIM1O00151 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.38□□□□□ -1.55
PDLIM1O00151 AC069154.1-201ENST00000432914 542 ntBASIC5.38□□□□□ -1.55
PDLIM1O00151 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PDLIM1O00151 NPM1P48-201ENST00000436002 853 ntBASIC5.38□□□□□ -1.55
PDLIM1O00151 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.38□□□□□ -1.55
PDLIM1O00151 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.38□□□□□ -1.55
PDLIM1O00151 RPS7P3-201ENST00000443360 580 ntBASIC5.38□□□□□ -1.55
PDLIM1O00151 TRIM60P16-201ENST00000444048 694 ntBASIC5.38□□□□□ -1.55
PDLIM1O00151 PPIAP27-201ENST00000453800 265 ntBASIC5.38□□□□□ -1.55
PDLIM1O00151 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.38□□□□□ -1.55
PDLIM1O00151 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.38□□□□□ -1.55
PDLIM1O00151 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC5.38□□□□□ -1.55
PDLIM1O00151 PFN1P8-201ENST00000497012 543 ntBASIC5.38□□□□□ -1.55
PDLIM1O00151 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.38□□□□□ -1.55
PDLIM1O00151 AC138938.1-201ENST00000515431 782 ntBASIC5.38□□□□□ -1.55
PDLIM1O00151 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.38□□□□□ -1.55
PDLIM1O00151 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.38□□□□□ -1.55
PDLIM1O00151 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.38□□□□□ -1.55
PDLIM1O00151 AC137627.1-201ENST00000545761 289 ntBASIC5.38□□□□□ -1.55
PDLIM1O00151 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.38□□□□□ -1.55
PDLIM1O00151 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms