Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.5□□□□□ -1.53
TMX2-CTNND1H3BSU7 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
TMX2-CTNND1H3BSU7 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TMX2-CTNND1H3BSU7 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.5□□□□□ -1.53
TMX2-CTNND1H3BSU7 SRRM1P3-201ENST00000426911 2678 ntBASIC5.5□□□□□ -1.53
TMX2-CTNND1H3BSU7 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
TMX2-CTNND1H3BSU7 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
TMX2-CTNND1H3BSU7 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
TMX2-CTNND1H3BSU7 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TMX2-CTNND1H3BSU7 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
TMX2-CTNND1H3BSU7 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TMX2-CTNND1H3BSU7 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TMX2-CTNND1H3BSU7 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TMX2-CTNND1H3BSU7 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC004656.1-201ENST00000568479 4951 ntBASIC5.49□□□□□ -1.53
TMX2-CTNND1H3BSU7 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.49□□□□□ -1.53
TMX2-CTNND1H3BSU7 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
TMX2-CTNND1H3BSU7 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.49□□□□□ -1.53
TMX2-CTNND1H3BSU7 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
TMX2-CTNND1H3BSU7 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
TMX2-CTNND1H3BSU7 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TMX2-CTNND1H3BSU7 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TMX2-CTNND1H3BSU7 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TMX2-CTNND1H3BSU7 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.49□□□□□ -1.53
TMX2-CTNND1H3BSU7 AL357752.1-201ENST00000412817 349 ntBASIC5.49□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC079809.1-201ENST00000415468 276 ntBASIC5.49□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC017078.1-201ENST00000416146 368 ntBASIC5.49□□□□□ -1.53
TMX2-CTNND1H3BSU7 SLC35E1P1-201ENST00000419313 864 ntBASIC5.49□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.49□□□□□ -1.53
TMX2-CTNND1H3BSU7 GAPDHP58-201ENST00000438477 1006 ntBASIC5.49□□□□□ -1.53
TMX2-CTNND1H3BSU7 RPS12P17-201ENST00000438591 377 ntBASIC5.49□□□□□ -1.53
TMX2-CTNND1H3BSU7 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.49□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC011225.1-201ENST00000457751 369 ntBASIC5.49□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC017007.3-201ENST00000479865 435 ntBASIC5.49□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.49□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.49□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC027026.1-201ENST00000532323 742 ntBASIC5.49□□□□□ -1.53
TMX2-CTNND1H3BSU7 AL359219.2-201ENST00000555184 348 ntBASIC5.49□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.49□□□□□ -1.53
TMX2-CTNND1H3BSU7 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.49□□□□□ -1.53
TMX2-CTNND1H3BSU7 AL121612.2-201ENST00000612261 482 ntBASIC5.49□□□□□ -1.53
TMX2-CTNND1H3BSU7 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.49□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC005840.5-201ENST00000619166 599 ntBASIC5.49□□□□□ -1.53
TMX2-CTNND1H3BSU7 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.49□□□□□ -1.53
TMX2-CTNND1H3BSU7 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.49□□□□□ -1.53
TMX2-CTNND1H3BSU7 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TMX2-CTNND1H3BSU7 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TMX2-CTNND1H3BSU7 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.49□□□□□ -1.53
TMX2-CTNND1H3BSU7 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.49□□□□□ -1.53
TMX2-CTNND1H3BSU7 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TMX2-CTNND1H3BSU7 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TMX2-CTNND1H3BSU7 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TMX2-CTNND1H3BSU7 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.48□□□□□ -1.53
TMX2-CTNND1H3BSU7 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
TMX2-CTNND1H3BSU7 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TMX2-CTNND1H3BSU7 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
TMX2-CTNND1H3BSU7 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.48□□□□□ -1.53
TMX2-CTNND1H3BSU7 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.48□□□□□ -1.53
TMX2-CTNND1H3BSU7 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.48□□□□□ -1.53
TMX2-CTNND1H3BSU7 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TMX2-CTNND1H3BSU7 RN7SKP185-201ENST00000362813 326 ntBASIC5.48□□□□□ -1.53
TMX2-CTNND1H3BSU7 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.48□□□□□ -1.53
TMX2-CTNND1H3BSU7 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.48□□□□□ -1.53
TMX2-CTNND1H3BSU7 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.48□□□□□ -1.53
TMX2-CTNND1H3BSU7 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.48□□□□□ -1.53
TMX2-CTNND1H3BSU7 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.48□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5.48□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.48□□□□□ -1.53
TMX2-CTNND1H3BSU7 AL390119.1-201ENST00000440329 312 ntBASIC5.48□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC015983.1-201ENST00000441577 373 ntBASIC5.48□□□□□ -1.53
TMX2-CTNND1H3BSU7 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.48□□□□□ -1.53
TMX2-CTNND1H3BSU7 SETP4-201ENST00000455717 868 ntBASIC5.48□□□□□ -1.53
TMX2-CTNND1H3BSU7 RPS23P2-201ENST00000463671 415 ntBASIC5.48□□□□□ -1.53
TMX2-CTNND1H3BSU7 AL157777.1-201ENST00000468100 304 ntBASIC5.48□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.48□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC093763.2-201ENST00000505334 1223 ntBASIC5.48□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC002456.2-201ENST00000509356 380 ntBASIC5.48□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC111000.6-201ENST00000514471 709 ntBASIC5.48□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.48□□□□□ -1.53
TMX2-CTNND1H3BSU7 RN7SKP288-201ENST00000516227 268 ntBASIC5.48□□□□□ -1.53
TMX2-CTNND1H3BSU7 MIR2117-201ENST00000516780 80 ntBASIC5.48□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC139365.2-201ENST00000517972 253 ntBASIC5.48□□□□□ -1.53
TMX2-CTNND1H3BSU7 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.48□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.48□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC096996.1-201ENST00000563813 325 ntBASIC5.48□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.48□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
TMX2-CTNND1H3BSU7 OR7A8P-201ENST00000595427 913 ntBASIC5.48□□□□□ -1.53
TMX2-CTNND1H3BSU7 BNIP3P32-201ENST00000600015 554 ntBASIC5.48□□□□□ -1.53
TMX2-CTNND1H3BSU7 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.48□□□□□ -1.53
TMX2-CTNND1H3BSU7 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.48□□□□□ -1.53
TMX2-CTNND1H3BSU7 SUGT1P3-202ENST00000604259 383 ntBASIC5.48□□□□□ -1.53
TMX2-CTNND1H3BSU7 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TMX2-CTNND1H3BSU7 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
TMX2-CTNND1H3BSU7 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
TMX2-CTNND1H3BSU7 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
TMX2-CTNND1H3BSU7 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
TMX2-CTNND1H3BSU7 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms