Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.79□□□□□ -1.48
SMIM28A0A1B0GU29 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC5.79□□□□□ -1.48
SMIM28A0A1B0GU29 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SMIM28A0A1B0GU29 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.79□□□□□ -1.48
SMIM28A0A1B0GU29 AC073465.2-201ENST00000440938 498 ntBASIC5.79□□□□□ -1.48
SMIM28A0A1B0GU29 AC058823.1-201ENST00000485315 474 ntBASIC5.79□□□□□ -1.48
SMIM28A0A1B0GU29 GLUD1P3-202ENST00000508551 200 ntBASIC5.79□□□□□ -1.48
SMIM28A0A1B0GU29 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.79□□□□□ -1.48
SMIM28A0A1B0GU29 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.79□□□□□ -1.48
SMIM28A0A1B0GU29 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.79□□□□□ -1.48
SMIM28A0A1B0GU29 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.79□□□□□ -1.48
SMIM28A0A1B0GU29 OR11J2P-201ENST00000555298 907 ntBASIC5.79□□□□□ -1.48
SMIM28A0A1B0GU29 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.79□□□□□ -1.48
SMIM28A0A1B0GU29 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.79□□□□□ -1.48
SMIM28A0A1B0GU29 RN7SL356P-201ENST00000582228 248 ntBASIC5.79□□□□□ -1.48
SMIM28A0A1B0GU29 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.79□□□□□ -1.48
SMIM28A0A1B0GU29 AL139407.1-201ENST00000613826 1175 ntBASIC5.79□□□□□ -1.48
SMIM28A0A1B0GU29 AC079776.5-201ENST00000641920 211 ntBASIC5.79□□□□□ -1.48
SMIM28A0A1B0GU29 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SMIM28A0A1B0GU29 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SMIM28A0A1B0GU29 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SMIM28A0A1B0GU29 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
SMIM28A0A1B0GU29 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SMIM28A0A1B0GU29 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SMIM28A0A1B0GU29 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SMIM28A0A1B0GU29 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.79□□□□□ -1.48
SMIM28A0A1B0GU29 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.79□□□□□ -1.48
SMIM28A0A1B0GU29 AC079097.1-201ENST00000512187 1399 ntBASIC5.79□□□□□ -1.48
SMIM28A0A1B0GU29 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.79□□□□□ -1.48
SMIM28A0A1B0GU29 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.78□□□□□ -1.48
SMIM28A0A1B0GU29 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.78□□□□□ -1.48
SMIM28A0A1B0GU29 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SMIM28A0A1B0GU29 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.78□□□□□ -1.48
SMIM28A0A1B0GU29 BCORP1-203ENST00000513194 5093 ntBASIC5.78□□□□□ -1.48
SMIM28A0A1B0GU29 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SMIM28A0A1B0GU29 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SMIM28A0A1B0GU29 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.78□□□□□ -1.48
SMIM28A0A1B0GU29 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SMIM28A0A1B0GU29 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.78□□□□□ -1.48
SMIM28A0A1B0GU29 AC015799.1-201ENST00000622996 3122 ntBASIC5.78□□□□□ -1.48
SMIM28A0A1B0GU29 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
SMIM28A0A1B0GU29 RPL23P2-201ENST00000320371 421 ntBASIC5.78□□□□□ -1.48
SMIM28A0A1B0GU29 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SMIM28A0A1B0GU29 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SMIM28A0A1B0GU29 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SMIM28A0A1B0GU29 DUTP5-201ENST00000406790 469 ntBASIC5.78□□□□□ -1.48
SMIM28A0A1B0GU29 SNORA11B-201ENST00000408175 129 ntBASIC5.78□□□□□ -1.48
SMIM28A0A1B0GU29 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.78□□□□□ -1.48
SMIM28A0A1B0GU29 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.78□□□□□ -1.48
SMIM28A0A1B0GU29 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.78□□□□□ -1.48
SMIM28A0A1B0GU29 PTMAP6-201ENST00000439110 327 ntBASIC5.78□□□□□ -1.48
SMIM28A0A1B0GU29 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.78□□□□□ -1.48
SMIM28A0A1B0GU29 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.78□□□□□ -1.48
SMIM28A0A1B0GU29 AL389915.2-201ENST00000454576 441 ntBASIC5.78□□□□□ -1.48
SMIM28A0A1B0GU29 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.78□□□□□ -1.48
SMIM28A0A1B0GU29 SCARNA20.4-201ENST00000516969 131 ntBASIC5.78□□□□□ -1.48
SMIM28A0A1B0GU29 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.78□□□□□ -1.48
SMIM28A0A1B0GU29 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.78□□□□□ -1.48
SMIM28A0A1B0GU29 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.78□□□□□ -1.48
SMIM28A0A1B0GU29 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.78□□□□□ -1.48
SMIM28A0A1B0GU29 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.78□□□□□ -1.48
SMIM28A0A1B0GU29 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.78□□□□□ -1.48
SMIM28A0A1B0GU29 AC044860.2-201ENST00000561005 179 ntBASIC5.78□□□□□ -1.48
SMIM28A0A1B0GU29 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SMIM28A0A1B0GU29 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.78□□□□□ -1.48
SMIM28A0A1B0GU29 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SMIM28A0A1B0GU29 AL021707.7-201ENST00000607991 416 ntBASIC5.78□□□□□ -1.48
SMIM28A0A1B0GU29 AL139124.1-201ENST00000609123 421 ntBASIC5.78□□□□□ -1.48
SMIM28A0A1B0GU29 AC090527.3-201ENST00000619041 548 ntBASIC5.78□□□□□ -1.48
SMIM28A0A1B0GU29 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC5.78□□□□□ -1.48
SMIM28A0A1B0GU29 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SMIM28A0A1B0GU29 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.78□□□□□ -1.48
SMIM28A0A1B0GU29 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
SMIM28A0A1B0GU29 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.78□□□□□ -1.48
SMIM28A0A1B0GU29 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SMIM28A0A1B0GU29 MRRFP1-201ENST00000435941 1675 ntBASIC5.78□□□□□ -1.48
SMIM28A0A1B0GU29 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
SMIM28A0A1B0GU29 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SMIM28A0A1B0GU29 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SMIM28A0A1B0GU29 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SMIM28A0A1B0GU29 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.77□□□□□ -1.48
SMIM28A0A1B0GU29 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SMIM28A0A1B0GU29 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
SMIM28A0A1B0GU29 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SMIM28A0A1B0GU29 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
SMIM28A0A1B0GU29 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SMIM28A0A1B0GU29 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SMIM28A0A1B0GU29 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.77□□□□□ -1.49
SMIM28A0A1B0GU29 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SMIM28A0A1B0GU29 AC092681.1-201ENST00000297369 291 ntBASIC5.77□□□□□ -1.49
SMIM28A0A1B0GU29 U8.4-201ENST00000363626 134 ntBASIC5.77□□□□□ -1.49
SMIM28A0A1B0GU29 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SMIM28A0A1B0GU29 SNORA70-201ENST00000384436 135 ntBASIC5.77□□□□□ -1.49
SMIM28A0A1B0GU29 U3.28-201ENST00000391249 210 ntBASIC5.77□□□□□ -1.49
SMIM28A0A1B0GU29 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
SMIM28A0A1B0GU29 HSPA8P15-201ENST00000401676 786 ntBASIC5.77□□□□□ -1.49
SMIM28A0A1B0GU29 PPIAP9-201ENST00000403866 498 ntBASIC5.77□□□□□ -1.49
SMIM28A0A1B0GU29 RN7SKP17-201ENST00000411242 351 ntBASIC5.77□□□□□ -1.49
SMIM28A0A1B0GU29 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SMIM28A0A1B0GU29 NDUFB4P8-201ENST00000435351 367 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms