Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 IGBP1P4-201ENST00000503202 879 ntBASIC5.34□□□□□ -1.55
TRBV5-4A0A0C4DH59 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.34□□□□□ -1.55
TRBV5-4A0A0C4DH59 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.34□□□□□ -1.55
TRBV5-4A0A0C4DH59 AC097486.1-201ENST00000515331 210 ntBASIC5.34□□□□□ -1.55
TRBV5-4A0A0C4DH59 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC5.34□□□□□ -1.55
TRBV5-4A0A0C4DH59 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.34□□□□□ -1.55
TRBV5-4A0A0C4DH59 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
TRBV5-4A0A0C4DH59 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.34□□□□□ -1.55
TRBV5-4A0A0C4DH59 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.34□□□□□ -1.55
TRBV5-4A0A0C4DH59 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TRBV5-4A0A0C4DH59 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.34□□□□□ -1.55
TRBV5-4A0A0C4DH59 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.34□□□□□ -1.55
TRBV5-4A0A0C4DH59 AC109583.2-201ENST00000617367 129 ntBASIC5.34□□□□□ -1.55
TRBV5-4A0A0C4DH59 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TRBV5-4A0A0C4DH59 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5.34□□□□□ -1.55
TRBV5-4A0A0C4DH59 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.34□□□□□ -1.55
TRBV5-4A0A0C4DH59 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TRBV5-4A0A0C4DH59 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TRBV5-4A0A0C4DH59 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
TRBV5-4A0A0C4DH59 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.34□□□□□ -1.56
TRBV5-4A0A0C4DH59 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.34□□□□□ -1.56
TRBV5-4A0A0C4DH59 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
TRBV5-4A0A0C4DH59 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.34□□□□□ -1.56
TRBV5-4A0A0C4DH59 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.33□□□□□ -1.56
TRBV5-4A0A0C4DH59 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRBV5-4A0A0C4DH59 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.33□□□□□ -1.56
TRBV5-4A0A0C4DH59 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
TRBV5-4A0A0C4DH59 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRBV5-4A0A0C4DH59 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TRBV5-4A0A0C4DH59 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.33□□□□□ -1.56
TRBV5-4A0A0C4DH59 AC092451.3-201ENST00000625067 1343 ntBASIC5.33□□□□□ -1.56
TRBV5-4A0A0C4DH59 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
TRBV5-4A0A0C4DH59 AL034549.2-201ENST00000618285 3373 ntBASIC5.33□□□□□ -1.56
TRBV5-4A0A0C4DH59 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
TRBV5-4A0A0C4DH59 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRBV5-4A0A0C4DH59 RNA5SP183-201ENST00000362452 119 ntBASIC5.33□□□□□ -1.56
TRBV5-4A0A0C4DH59 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TRBV5-4A0A0C4DH59 TRAV35-201ENST00000390462 330 ntBASIC5.33□□□□□ -1.56
TRBV5-4A0A0C4DH59 RNA5SP339-201ENST00000390987 122 ntBASIC5.33□□□□□ -1.56
TRBV5-4A0A0C4DH59 U3.25-201ENST00000391209 220 ntBASIC5.33□□□□□ -1.56
TRBV5-4A0A0C4DH59 SNORA11.3-201ENST00000408471 128 ntBASIC5.33□□□□□ -1.56
TRBV5-4A0A0C4DH59 RNA5SP487-201ENST00000410186 122 ntBASIC5.33□□□□□ -1.56
TRBV5-4A0A0C4DH59 RN7SKP206-201ENST00000410823 293 ntBASIC5.33□□□□□ -1.56
TRBV5-4A0A0C4DH59 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TRBV5-4A0A0C4DH59 YY1P1-201ENST00000427625 668 ntBASIC5.33□□□□□ -1.56
TRBV5-4A0A0C4DH59 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.33□□□□□ -1.56
TRBV5-4A0A0C4DH59 CYCSP12-201ENST00000437729 300 ntBASIC5.33□□□□□ -1.56
TRBV5-4A0A0C4DH59 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.33□□□□□ -1.56
TRBV5-4A0A0C4DH59 AC090804.1-201ENST00000448870 490 ntBASIC5.33□□□□□ -1.56
TRBV5-4A0A0C4DH59 RPS24P16-201ENST00000497294 392 ntBASIC5.33□□□□□ -1.56
TRBV5-4A0A0C4DH59 HMGN1P9-201ENST00000515212 298 ntBASIC5.33□□□□□ -1.56
TRBV5-4A0A0C4DH59 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.33□□□□□ -1.56
TRBV5-4A0A0C4DH59 AC130364.2-201ENST00000528639 604 ntBASIC5.33□□□□□ -1.56
TRBV5-4A0A0C4DH59 AC126177.5-201ENST00000549599 178 ntBASIC5.33□□□□□ -1.56
TRBV5-4A0A0C4DH59 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC5.33□□□□□ -1.56
TRBV5-4A0A0C4DH59 MRPS21P9-201ENST00000571150 257 ntBASIC5.33□□□□□ -1.56
TRBV5-4A0A0C4DH59 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.33□□□□□ -1.56
TRBV5-4A0A0C4DH59 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC5.33□□□□□ -1.56
TRBV5-4A0A0C4DH59 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.33□□□□□ -1.56
TRBV5-4A0A0C4DH59 AC011445.2-201ENST00000599274 173 ntBASIC5.33□□□□□ -1.56
TRBV5-4A0A0C4DH59 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TRBV5-4A0A0C4DH59 NF1P10-201ENST00000613227 742 ntBASIC5.33□□□□□ -1.56
TRBV5-4A0A0C4DH59 WBP1LP8-201ENST00000617401 327 ntBASIC5.33□□□□□ -1.56
TRBV5-4A0A0C4DH59 SNORA11.6-201ENST00000619030 128 ntBASIC5.33□□□□□ -1.56
TRBV5-4A0A0C4DH59 AP003400.2-201ENST00000624036 666 ntBASIC5.33□□□□□ -1.56
TRBV5-4A0A0C4DH59 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC5.33□□□□□ -1.56
TRBV5-4A0A0C4DH59 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.33□□□□□ -1.56
TRBV5-4A0A0C4DH59 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.33□□□□□ -1.56
TRBV5-4A0A0C4DH59 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRBV5-4A0A0C4DH59 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TRBV5-4A0A0C4DH59 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.33□□□□□ -1.56
TRBV5-4A0A0C4DH59 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TRBV5-4A0A0C4DH59 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TRBV5-4A0A0C4DH59 AL078621.3-201ENST00000623707 2042 ntBASIC5.33□□□□□ -1.56
TRBV5-4A0A0C4DH59 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.33□□□□□ -1.56
TRBV5-4A0A0C4DH59 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TRBV5-4A0A0C4DH59 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.32□□□□□ -1.56
TRBV5-4A0A0C4DH59 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.32□□□□□ -1.56
TRBV5-4A0A0C4DH59 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
TRBV5-4A0A0C4DH59 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TRBV5-4A0A0C4DH59 AC140134.1-201ENST00000511830 3544 ntBASIC5.32□□□□□ -1.56
TRBV5-4A0A0C4DH59 MAPK10-261ENST00000641050 3109 ntBASIC5.32□□□□□ -1.56
TRBV5-4A0A0C4DH59 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
TRBV5-4A0A0C4DH59 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.32□□□□□ -1.56
TRBV5-4A0A0C4DH59 RNA5SP435-201ENST00000364044 108 ntBASIC5.32□□□□□ -1.56
TRBV5-4A0A0C4DH59 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.32□□□□□ -1.56
TRBV5-4A0A0C4DH59 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
TRBV5-4A0A0C4DH59 AC009804.1-201ENST00000400949 179 ntBASIC5.32□□□□□ -1.56
TRBV5-4A0A0C4DH59 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
TRBV5-4A0A0C4DH59 OR4K12P-201ENST00000406538 961 ntBASIC5.32□□□□□ -1.56
TRBV5-4A0A0C4DH59 OR3A2-201ENST00000408891 1076 ntBASIC5.32□□□□□ -1.56
TRBV5-4A0A0C4DH59 AL390774.1-201ENST00000411924 246 ntBASIC5.32□□□□□ -1.56
TRBV5-4A0A0C4DH59 RPS20P25-201ENST00000412447 352 ntBASIC5.32□□□□□ -1.56
TRBV5-4A0A0C4DH59 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.32□□□□□ -1.56
TRBV5-4A0A0C4DH59 AL354766.1-201ENST00000423396 542 ntBASIC5.32□□□□□ -1.56
TRBV5-4A0A0C4DH59 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC5.32□□□□□ -1.56
TRBV5-4A0A0C4DH59 RPL7AP49-201ENST00000429522 581 ntBASIC5.32□□□□□ -1.56
TRBV5-4A0A0C4DH59 AC124944.2-201ENST00000429866 1242 ntBASIC5.32□□□□□ -1.56
TRBV5-4A0A0C4DH59 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TRBV5-4A0A0C4DH59 AL591438.1-201ENST00000433508 581 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms