Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 RN7SL356P-201ENST00000582228 248 ntBASIC4.86□□□□□ -1.63
TRAV27A0A087WT01 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.86□□□□□ -1.63
TRAV27A0A087WT01 AL583832.1-201ENST00000603227 784 ntBASIC4.86□□□□□ -1.63
TRAV27A0A087WT01 AC092944.2-201ENST00000605443 889 ntBASIC4.86□□□□□ -1.63
TRAV27A0A087WT01 AL365181.4-201ENST00000609800 547 ntBASIC4.86□□□□□ -1.63
TRAV27A0A087WT01 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRAV27A0A087WT01 LINC01963-201ENST00000562038 3148 ntBASIC4.86□□□□□ -1.63
TRAV27A0A087WT01 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRAV27A0A087WT01 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
TRAV27A0A087WT01 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
TRAV27A0A087WT01 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRAV27A0A087WT01 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TRAV27A0A087WT01 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRAV27A0A087WT01 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
TRAV27A0A087WT01 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
TRAV27A0A087WT01 OR9G4-201ENST00000302957 984 ntBASIC4.85□□□□□ -1.63
TRAV27A0A087WT01 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TRAV27A0A087WT01 RNA5SP46-201ENST00000362370 120 ntBASIC4.85□□□□□ -1.63
TRAV27A0A087WT01 RNU1-19P-201ENST00000363306 165 ntBASIC4.85□□□□□ -1.63
TRAV27A0A087WT01 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRAV27A0A087WT01 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
TRAV27A0A087WT01 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC4.85□□□□□ -1.63
TRAV27A0A087WT01 RPL12P9-201ENST00000412942 488 ntBASIC4.85□□□□□ -1.63
TRAV27A0A087WT01 AL596448.1-201ENST00000415024 392 ntBASIC4.85□□□□□ -1.63
TRAV27A0A087WT01 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.85□□□□□ -1.63
TRAV27A0A087WT01 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.85□□□□□ -1.63
TRAV27A0A087WT01 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.85□□□□□ -1.63
TRAV27A0A087WT01 GSTM5P1-201ENST00000434751 660 ntBASIC4.85□□□□□ -1.63
TRAV27A0A087WT01 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.85□□□□□ -1.63
TRAV27A0A087WT01 PPIA-203ENST00000451562 544 ntTSL 2 BASIC4.85□□□□□ -1.63
TRAV27A0A087WT01 AL035090.1-201ENST00000454835 332 ntBASIC4.85□□□□□ -1.63
TRAV27A0A087WT01 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC4.85□□□□□ -1.63
TRAV27A0A087WT01 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.85□□□□□ -1.63
TRAV27A0A087WT01 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.85□□□□□ -1.63
TRAV27A0A087WT01 AC138866.2-201ENST00000508650 584 ntBASIC4.85□□□□□ -1.63
TRAV27A0A087WT01 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.85□□□□□ -1.63
TRAV27A0A087WT01 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.85□□□□□ -1.63
TRAV27A0A087WT01 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC4.85□□□□□ -1.63
TRAV27A0A087WT01 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.85□□□□□ -1.63
TRAV27A0A087WT01 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.85□□□□□ -1.63
TRAV27A0A087WT01 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.85□□□□□ -1.63
TRAV27A0A087WT01 MTCYBP13-201ENST00000578634 1093 ntBASIC4.85□□□□□ -1.63
TRAV27A0A087WT01 SETP3-201ENST00000581726 813 ntBASIC4.85□□□□□ -1.63
TRAV27A0A087WT01 PRPF19P1-201ENST00000584766 898 ntBASIC4.85□□□□□ -1.63
TRAV27A0A087WT01 AC027243.2-201ENST00000602530 724 ntBASIC4.85□□□□□ -1.63
TRAV27A0A087WT01 AC100767.2-201ENST00000604840 693 ntBASIC4.85□□□□□ -1.63
TRAV27A0A087WT01 AC109583.2-201ENST00000617367 129 ntBASIC4.85□□□□□ -1.63
TRAV27A0A087WT01 AL359742.1-201ENST00000622497 540 ntBASIC4.85□□□□□ -1.63
TRAV27A0A087WT01 AC091932.2-201ENST00000623014 291 ntBASIC4.85□□□□□ -1.63
TRAV27A0A087WT01 AC132068.1-201ENST00000623805 459 ntBASIC4.85□□□□□ -1.63
TRAV27A0A087WT01 AP003400.3-201ENST00000624904 346 ntBASIC4.85□□□□□ -1.63
TRAV27A0A087WT01 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC4.85□□□□□ -1.63
TRAV27A0A087WT01 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
TRAV27A0A087WT01 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
TRAV27A0A087WT01 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC4.85□□□□□ -1.63
TRAV27A0A087WT01 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRAV27A0A087WT01 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.85□□□□□ -1.63
TRAV27A0A087WT01 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.85□□□□□ -1.63
TRAV27A0A087WT01 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TRAV27A0A087WT01 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRAV27A0A087WT01 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
TRAV27A0A087WT01 AP005435.3-201ENST00000531260 3198 ntBASIC4.85□□□□□ -1.63
TRAV27A0A087WT01 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.84□□□□□ -1.63
TRAV27A0A087WT01 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRAV27A0A087WT01 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.84□□□□□ -1.63
TRAV27A0A087WT01 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TRAV27A0A087WT01 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC4.84□□□□□ -1.63
TRAV27A0A087WT01 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRAV27A0A087WT01 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TRAV27A0A087WT01 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRAV27A0A087WT01 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
TRAV27A0A087WT01 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
TRAV27A0A087WT01 U3.7-201ENST00000363668 216 ntBASIC4.84□□□□□ -1.63
TRAV27A0A087WT01 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC4.84□□□□□ -1.63
TRAV27A0A087WT01 SNORA48.4-201ENST00000391089 134 ntBASIC4.84□□□□□ -1.63
TRAV27A0A087WT01 CXADRP1-201ENST00000398098 1095 ntBASIC4.84□□□□□ -1.63
TRAV27A0A087WT01 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC4.84□□□□□ -1.63
TRAV27A0A087WT01 SRSF1P1-201ENST00000424058 520 ntBASIC4.84□□□□□ -1.63
TRAV27A0A087WT01 RPS10P18-201ENST00000442662 495 ntBASIC4.84□□□□□ -1.63
TRAV27A0A087WT01 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC4.84□□□□□ -1.63
TRAV27A0A087WT01 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC4.84□□□□□ -1.63
TRAV27A0A087WT01 AL672138.1-201ENST00000450604 1015 ntBASIC4.84□□□□□ -1.63
TRAV27A0A087WT01 DEFB109A-201ENST00000482450 265 ntBASIC4.84□□□□□ -1.63
TRAV27A0A087WT01 RPL15P21-201ENST00000495592 567 ntBASIC4.84□□□□□ -1.63
TRAV27A0A087WT01 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC4.84□□□□□ -1.63
TRAV27A0A087WT01 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC4.84□□□□□ -1.63
TRAV27A0A087WT01 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC4.84□□□□□ -1.63
TRAV27A0A087WT01 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4.84□□□□□ -1.63
TRAV27A0A087WT01 AC098976.1-201ENST00000513014 541 ntBASIC4.84□□□□□ -1.63
TRAV27A0A087WT01 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC4.84□□□□□ -1.63
TRAV27A0A087WT01 NRBF2P4-201ENST00000520874 850 ntBASIC4.84□□□□□ -1.63
TRAV27A0A087WT01 AC078878.1-201ENST00000539832 958 ntBASIC4.84□□□□□ -1.63
TRAV27A0A087WT01 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC4.84□□□□□ -1.63
TRAV27A0A087WT01 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC4.84□□□□□ -1.63
TRAV27A0A087WT01 AC019322.1-201ENST00000571869 389 ntBASIC4.84□□□□□ -1.63
TRAV27A0A087WT01 AC090286.3-201ENST00000573133 187 ntBASIC4.84□□□□□ -1.63
TRAV27A0A087WT01 AC010503.3-201ENST00000594355 540 ntBASIC4.84□□□□□ -1.63
TRAV27A0A087WT01 CXADRP3-202ENST00000617265 1100 ntBASIC4.84□□□□□ -1.63
TRAV27A0A087WT01 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRAV27A0A087WT01 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms